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Material Type: Artigo
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Robustness and reproducibility of simple and complex synthetic logic circuit designs using a DBTL loopBreschine Cummins Justin Vrana; Robert C Moseley; Hamed Eramian; Anastasia Deckard; Pedro Fontanarrosa; Daniel Bryce; Mark Weston; George Zheng; Joshua Nowak; Francis C Motta; Mohammed Eslami; Kara Layne Johnson; Robert P Goldman; Chris J Myers; Tessa Johnson; Matthew W Vaughn; Niall Gaffney; Joshua Urrutia; Shweta Gopaulakrishnan; Vanessa Biggers; Trissha R Higa; Lorraine A Mosqueda; Márcio Fuzeto Gameiro; Tomás Gedeon; Konstantin Mischaikow; Jacob Beal; Bryan Bartley; Tom Mitchell; Tramy T Nguyen; Nicholas Roehner; Steve HaaseSynthetic Biology Oxford : Oxford University Press v. 8, n. 1, p. 1-17, 2023Oxford 2023Localização: ICMC - Inst. Ciên. Mat. Computação (PROD-3140067 )(Acessar) |
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Material Type: Artigo
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Genomic distribution of H3K9me2 and DNA methylation in a maize genomeWest, Patrick T ; Li, Qing ; Ji, Lexiang ; Eichten, Steven R ; Song, Jawon ; Vaughn, Matthew W ; Schmitz, Robert J ; Springer, Nathan M Sullivan, Beth A.PloS one, 2014-08, Vol.9 (8), p.e105267-e105267 [Periódico revisado por pares]United States: Public Library of ScienceTexto completo disponível |
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Material Type: Artigo
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RNA-directed DNA methylation enforces boundaries between heterochromatin and euchromatin in the maize genomeLi, Qing ; Gent, Jonathan I. ; Zynda, Greg ; Song, Jawon ; Makarevitch, Irina ; Hirsch, Cory D. ; Hirsch, Candice N. ; Dawe, R. Kelly ; Madzima, Thelma F. ; McGinnis, Karen M. ; Lisch, Damon ; Schmitz, Robert J. ; Vaughn, Matthew W. ; Springer, Nathan M.Proceedings of the National Academy of Sciences - PNAS, 2015-11, Vol.112 (47), p.14728-14733 [Periódico revisado por pares]United States: National Academy of SciencesTexto completo disponível |
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Material Type: Artigo
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Epigenetic and Genetic Influences on DNA Methylation Variation in Maize PopulationsEichten, Steven R. ; Briskine, Roman ; Song, Jawon ; Li, Qing ; Swanson-Wagner, Ruth ; Hermanson, Peter J. ; Waters, Amanda J. ; Starr, Evan ; West, Patrick T. ; Tiffin, Peter ; Myers, Chad L. ; Vaughn, Matthew W. ; Springer, Nathan M.The Plant cell, 2013-08, Vol.25 (8), p.2783-2797 [Periódico revisado por pares]American Society of Plant BiologistsTexto completo disponível |
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Material Type: Artigo
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Spreading of heterochromatin is limited to specific families of maize retrotransposonsEichten, Steven R ; Ellis, Nathanael A ; Makarevitch, Irina ; Yeh, Cheng-Ting ; Gent, Jonathan I ; Guo, Lin ; McGinnis, Karen M ; Zhang, Xiaoyu ; Schnable, Patrick S ; Vaughn, Matthew W ; Dawe, R Kelly ; Springer, Nathan M Gaut, Brandon S.PLoS genetics, 2012-12, Vol.8 (12), p.e1003127-e1003127 [Periódico revisado por pares]United States: Public Library of ScienceTexto completo disponível |
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Material Type: Artigo
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Comprehensive analysis of imprinted genes in maize reveals allelic variation for imprinting and limited conservation with other speciesWaters, Amanda J. ; Bilinski, Paul ; Eichten, Steven R. ; Vaughn, Matthew W. ; Ross-Ibarra, Jeffrey ; Gehring, Mary ; Springer, Nathan M.Proceedings of the National Academy of Sciences - PNAS, 2013-11, Vol.110 (48), p.19639-19644 [Periódico revisado por pares]United States: National Academy of SciencesTexto completo disponível |
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7 |
Material Type: Artigo
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Parent-of-Origin Effects on Gene Expression and DNA Methylation in the Maize EndospermWaters, Amanda J. ; Makarevitch, Irina ; Eichten, Steve R. ; Swanson-Wagner, Ruth A. ; Yeh, Cheng-Ting ; Xu, Wayne ; Schnable, Patrick S. ; Vaughn, Matthew W. ; Gehring, Mary ; Springer, Nathan M.The Plant cell, 2011-12, Vol.23 (12), p.4221-4233 [Periódico revisado por pares]United States: American Society of Plant BiologistsTexto completo disponível |
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8 |
Material Type: Artigo
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Genetic Perturbation of the Maize MethylomeLi, Qing ; Eichten, Steven R. ; Hermanson, Peter J. ; Zaunbrecher, Virginia M. ; Song, Jawon ; Wendt, Jennifer ; Rosenbaum, Heidi ; Madzima, Thelma F. ; Sloan, Amy E. ; Huang, Ji ; Burgess, Daniel L. ; Richmond, Todd A. ; McGinnis, Karen M. ; Meeley, Robert B. ; Danilevskaya, Olga N. ; Vaughn, Matthew W. ; Kaeppler, Shawn M. ; Jeddeloh, Jeffrey A. ; Springer, Nathan M.The Plant cell, 2014-12, Vol.26 (12), p.4602-4616 [Periódico revisado por pares]United States: American Society of Plant BiologistsTexto completo disponível |
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9 |
Material Type: Artigo
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An ‘eFP‐Seq Browser’ for visualizing and exploring RNA sequencing dataSullivan, Alexander ; Purohit, Priyank K. ; Freese, Nowlan H. ; Pasha, Asher ; Esteban, Eddi ; Waese, Jamie ; Wu, Alison ; Chen, Michelle ; Chin, Chih Y. ; Song, Richard ; Watharkar, Sneha R. ; Chan, Agnes P. ; Krishnakumar, Vivek ; Vaughn, Matthew W. ; Town, Chris ; Loraine, Ann E. ; Provart, Nicholas J.The Plant journal : for cell and molecular biology, 2019-11, Vol.100 (3), p.641-654 [Periódico revisado por pares]England: Blackwell Publishing LtdTexto completo disponível |
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10 |
Material Type: Artigo
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Epigenetic natural variation in Arabidopsis thalianaVaughn, Matthew W ; Tanurdzić, Milos ; Lippman, Zachary ; Jiang, Hongmei ; Carrasquillo, Robert ; Rabinowicz, Pablo D ; Dedhia, Neilay ; McCombie, W Richard ; Agier, Nicolas ; Bulski, Agnès ; Colot, Vincent ; Doerge, R W ; Martienssen, Robert A Carrington, James CPLoS biology, 2007-07, Vol.5 (7), p.e174-e174 [Periódico revisado por pares]United States: Public Library of ScienceTexto completo disponível |