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Analysing high-throughput sequencing data in Python with HTSeq 2.0
Analysing high-throughput sequencing data in Python with HTSeq 2.0
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Analysing high-throughput sequencing data in Python with HTSeq 2.0

Putri, Givanna H ; Anders, Simon ; Pyl, Paul Theodor ; Pimanda, John E ; Zanini, Fabio Boeva, Valentina

Bioinformatics, 2022-05, Vol.38 (10), p.2943-2945 [Periódico revisado por pares]

England: Oxford University Press

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2
The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
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The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications

Nilsson, Rolf Henrik ; Larsson, Karl-Henrik ; Taylor, Andy F S ; Bengtsson-Palme, Johan ; Jeppesen, Thomas S ; Schigel, Dmitry ; Kennedy, Peter ; Picard, Kathryn ; Glöckner, Frank Oliver ; Tedersoo, Leho ; Saar, Irja ; Kõljalg, Urmas ; Abarenkov, Kessy

Nucleic acids research, 2019-01, Vol.47 (D1), p.D259-D264 [Periódico revisado por pares]

England: Oxford University Press

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3
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)
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Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)

Klionsky, Daniel ; Abdel-Aziz, Amal Kamal ; Abdelfatah, Sara ; Abdellatif, Mahmoud ; Abdoli, Asghar ; Abel, Steffen ; Abeliovich, Hagai ; Abildgaard, Marie ; Abudu, Yakubu Princely ; Acevedo-Arozena, Abraham ; Adamopoulos, Iannis ; Adeli, Khosrow ; Adolph, Timon ; Adornetto, Annagrazia ; Aflaki, Elma ; Agam, Galila ; Agarwal, Anupam ; Aggarwal, Bharat ; Agnello, Maria ; Agostinis, Patrizia ; Agrewala, Javed ; Agrotis, Alexander ; Aguilar, Patricia ; Ahmad, S. Tariq ; Ahmed, Zubair ; Ahumada-Castro, Ulises ; Aits, Sonja ; Aizawa, Shu ; Akkoc, Yunus ; Akoumianaki, Tonia ; Akpinar, Hafize Aysin ; Al-Abd, Ahmed ; Al-Akra, Lina ; Al-Gharaibeh, Abeer ; Alaoui-Jamali, Moulay ; Alberti, Simon ; Alcocer-Gómez, Elísabet ; Alessandri, Cristiano ; Ali, Muhammad ; Alim Al-Bari, M. Abdul ; Aliwaini, Saeb ; Alizadeh, Javad ; Almacellas, Eugènia ; Almasan, Alexandru ; Alonso, Alicia ; Alonso, Guillermo ; Altan-Bonnet, Nihal ; Altieri, Dario ; Álvarez, Élida ; Alves, Sara ; Alves da Costa, Cristine ; Alzaharna, Mazen ; Amadio, Marialaura ; Amantini, Consuelo ; Amaral, Cristina ; Ambrosio, Susanna ; Amer, Amal ; Ammanathan, Veena ; An, Zhenyi ; Andersen, Stig ; Andrabi, Shaida ; Andrade-Silva, Magaiver ; Andres, Allen ; Angelini, Sabrina ; Ann, David ; Anozie, Uche ; Ansari, Mohammad ; Antas, Pedro ; Antebi, Adam ; Antón, Zuriñe ; Anwar, Tahira ; Apetoh, Lionel ; Apostolova, Nadezda ; Araki, Toshiyuki ; Araki, Yasuhiro ; Arasaki, Kohei ; Araújo, Wagner ; Araya, Jun ; Arden, Catherine ; Arévalo, Maria-Angeles ; Arguelles, Sandro ; Arias, Esperanza ; Arikkath, Jyothi ; Arimoto, Hirokazu ; Ariosa, Aileen ; Armstrong-James, Darius ; Arnauné-Pelloquin, Laetitia ; Aroca, Angeles ; Arroyo, Daniela ; Arsov, Ivica ; Artero, Rubén ; Asaro, Dalia Maria Lucia ; Aschner, Michael ; Ashrafizadeh, Milad ; Ashur-Fabian, Osnat ; Atanasov, Atanas ; Au, Alicia ; Auberger, Patrick ; Auner, Holger ; Aurelian, Laure

Autophagy, 2021-01, Vol.17 (1), p.1-382 [Periódico revisado por pares]

Taylor & Francis

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4
A primer on deep learning in genomics
A primer on deep learning in genomics
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A primer on deep learning in genomics

Zou, James ; Huss, Mikael ; Abid, Abubakar ; Mohammadi, Pejman ; Torkamani, Ali ; Telenti, Amalio

Nature genetics, 2019-01, Vol.51 (1), p.12-18 [Periódico revisado por pares]

United States: Nature Publishing Group

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5
An atlas of human metabolism
An atlas of human metabolism
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An atlas of human metabolism

Robinson, Jonathan L ; Kocabaş, Pınar ; Wang, Hao ; Cholley, Pierre-Etienne ; Cook, Daniel ; Nilsson, Avlant ; Anton, Mihail ; Ferreira, Raphael ; Domenzain, Iván ; Billa, Virinchi ; Limeta, Angelo ; Hedin, Alex ; Gustafsson, Johan ; Kerkhoven, Eduard J ; Svensson, L Thomas ; Palsson, Bernhard O ; Mardinoglu, Adil ; Hansson, Lena ; Uhlén, Mathias ; Nielsen, Jens

Science signaling, 2020-03, Vol.13 (624) [Periódico revisado por pares]

United States: The American Association for the Advancement of Science

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6
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis
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BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis

Bouckaert, Remco ; Vaughan, Timothy G ; Barido-Sottani, Joëlle ; Duchêne, Sebastián ; Fourment, Mathieu ; Gavryushkina, Alexandra ; Heled, Joseph ; Jones, Graham ; Kühnert, Denise ; De Maio, Nicola ; Matschiner, Michael ; Mendes, Fábio K ; Müller, Nicola F ; Ogilvie, Huw A ; du Plessis, Louis ; Popinga, Alex ; Rambaut, Andrew ; Rasmussen, David ; Siveroni, Igor ; Suchard, Marc A ; Wu, Chieh-Hsi ; Xie, Dong ; Zhang, Chi ; Stadler, Tanja ; Drummond, Alexei J Pertea, Mihaela

PLoS computational biology, 2019-04, Vol.15 (4), p.e1006650-e1006650 [Periódico revisado por pares]

United States: Public Library of Science

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7
PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data
PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data
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PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data

Franzén, Oscar ; Gan, Li-Ming ; Björkegren, Johan L M

Database : the journal of biological databases and curation, 2019, Vol.2019 [Periódico revisado por pares]

England: Oxford University Press

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8
Mycobiome diversity: high-throughput sequencing and identification of fungi
Mycobiome diversity: high-throughput sequencing and identification of fungi
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Mycobiome diversity: high-throughput sequencing and identification of fungi

Nilsson, R Henrik ; Anslan, Sten ; Bahram, Mohammad ; Wurzbacher, Christian ; Baldrian, Petr ; Tedersoo, Leho

Nature reviews. Microbiology, 2019, Vol.17 (2), p.95-109 [Periódico revisado por pares]

England: Nature Publishing Group

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9
Global diversity and geography of soil fungi
Global diversity and geography of soil fungi
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Global diversity and geography of soil fungi

Tedersoo, Leho ; Bahram, Mohammad ; Põlme, Sergei ; Kõljalg, Urmas ; Yorou, Nourou S. ; Wijesundera, Ravi ; Ruiz, Luis Villarreal ; Vasco-Palacios, Aída M. ; Thu, Pham Quang ; Suija, Ave ; Smith, Matthew E. ; Sharp, Cathy ; Saluveer, Erki ; Saitta, Alessandro ; Rosas, Miguel ; Riit, Taavi ; Ratkowsky, David ; Pritsch, Karin ; Põldmaa, Kadri ; Piepenbring, Meike ; Phosri, Cherdchai ; Peterson, Marko ; Parts, Kaarin ; Pärtel, Kadri ; Otsing, Eveli ; Nouhra, Eduardo ; Njouonkou, André L. ; Nilsson, R. Henrik ; Morgado, Luis N. ; Mayor, Jordan ; May, Tom W. ; Majuakim, Luiza ; Lodge, D. Jean ; Lee, Su See ; Larsson, Karl-Henrik ; Kohout, Petr ; Hosaka, Kentaro ; Hiiesalu, Indrek ; Henkel, Terry W. ; Harend, Helery ; Guo, Liang-dong ; Greslebin, Alina ; Grelet, Gwen ; Geml, Jozsef ; Gates, Genevieve ; Dunstan, William ; Dunk, Chris ; Drenkhan, Rein ; Dearnaley, John ; De Kesel, André ; Dang, Tan ; Chen, Xin ; Buegger, Franz ; Brearley, Francis Q. ; Bonito, Gregory ; Anslan, Sten ; Abell, Sandra ; Abarenkov, Kessy

Science (American Association for the Advancement of Science), 2014-11, Vol.346 (6213), p.1078-1078 [Periódico revisado por pares]

Washington: American Association for the Advancement of Science

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10
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer
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Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer

Wirbel, Jakob ; Pyl, Paul Theodor ; Kartal, Ece ; Zych, Konrad ; Kashani, Alireza ; Milanese, Alessio ; Fleck, Jonas S ; Voigt, Anita Y ; Palleja, Albert ; Ponnudurai, Ruby ; Sunagawa, Shinichi ; Coelho, Luis Pedro ; Schrotz-King, Petra ; Vogtmann, Emily ; Habermann, Nina ; Niméus, Emma ; Thomas, Andrew M ; Manghi, Paolo ; Gandini, Sara ; Serrano, Davide ; Mizutani, Sayaka ; Shiroma, Hirotsugu ; Shiba, Satoshi ; Shibata, Tatsuhiro ; Yachida, Shinichi ; Yamada, Takuji ; Waldron, Levi ; Naccarati, Alessio ; Segata, Nicola ; Sinha, Rashmi ; Ulrich, Cornelia M ; Brenner, Hermann ; Arumugam, Manimozhiyan ; Bork, Peer ; Zeller, Georg

Nature medicine, 2019-04, Vol.25 (4), p.679-689 [Periódico revisado por pares]

United States: Nature Publishing Group

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