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The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
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The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models

Shi, Leming ; Wen, Zhining ; Walker, Stephen J ; Su, Zhenqiang ; Pusztai, Lajos ; Barlogie, Bart ; Fischer, Matthias ; Furlanello, Cesare ; Megherbi, Dalila B ; Symmans, W Fraser ; Wang, May D ; Zhang, John ; Chen, Minjun ; Cheng, Jie ; Chou, Jeff ; Davison, Timothy S ; Delorenzi, Mauro ; Devanarayan, Viswanath ; Dix, David J ; Dopazo, Joaquin ; Dorff, Kevin C ; Fan, Shicai ; Fan, Xiaohui ; Fang, Hong ; Hong, Huixiao ; Irizarry, Rafael A ; Juraeva, Dilafruz ; Lababidi, Samir ; Li, Li ; Li, Yanen ; Li, Zhen ; Lin, Simon M ; Luo, Jun ; Luo, Wen ; McCall, Matthew N ; Nikolsky, Yuri ; Pennello, Gene A ; Perkins, Roger G ; Qian, Feng ; Wang, Sue Jane ; Wu, Yichao ; Yousef, Waleed A ; Zhang, Liang ; Zhang, Xuegong ; Zhong, Sheng ; Zhu, Sheng ; Arasappan, Dhivya ; Brennan, Richard J ; Buness, Andreas ; Cheng, Yiyu ; Czika, Wendy ; Demichelis, Francesca ; Deng, Xutao ; Dosymbekov, Damir ; Fulmer-Smentek, Stephanie ; Han, Jing ; Huang, Jianping ; Johnson, Charles D ; Kahlert, Yvonne ; Kohl, Matthias ; Li, Menglong ; Li, Quan-Zhen ; Li, Shao ; Li, Zhiguang ; Liu, Ying ; Liu, Zhichao ; Meehan, Joseph ; Moffitt, Richard A ; Montaner, David ; Mukherjee, Piali ; Mulligan, George J ; Neville, Padraic ; Nikolskaya, Tatiana ; Ning, Baitang ; Page, Grier P ; Parry, R Mitchell ; Quanz, Brian ; Ren, Yi ; Samuelson, Frank W ; Schumacher, Martin M ; Shambaugh, Joseph D ; Shi, Qiang ; Si, Shengzhu ; Sotiriou, Christos ; Steiner, Guido ; Tang, Rong ; Tezak, Zivana ; Thorn, Brett ; Tsyganova, Marina ; Vega, Silvia C ; Visintainer, Roberto ; Wang, Eric ; Wang, Wei ; Woods, Matthew ; Wu, Shujian ; Xiao, Nianqing ; Zhang, Li ; Zhang, Min ; Puri, Raj K ; Tong, Weida

Nature biotechnology, 2010-08, Vol.28 (8), p.827-838 [Periódico revisado por pares]

New York, NY: Nature Publishing Group

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2
LIVECell—A large-scale dataset for label-free live cell segmentation
LIVECell—A large-scale dataset for label-free live cell segmentation
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LIVECell—A large-scale dataset for label-free live cell segmentation

Edlund, Christoffer ; Jackson, Timothy R ; Khalid, Nabeel ; Bevan, Nicola ; Dale, Timothy ; Dengel, Andreas ; Ahmed, Sheraz ; Trygg, Rickard ; Sjogren, Rickard

Nature methods, 2021-09, Vol.18 (9), p.1038-1045 [Periódico revisado por pares]

New York: Nature Publishing Group

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Chemometrics in metabolomics—A review in human disease diagnosis
Chemometrics in metabolomics—A review in human disease diagnosis
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Chemometrics in metabolomics—A review in human disease diagnosis

Madsen, Rasmus ; Lundstedt, Torbjörn ; Trygg, Johan

Analytica chimica acta, 2010-02, Vol.659 (1), p.23-33 [Periódico revisado por pares]

Amsterdam: Elsevier B.V

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4
CV-ANOVA for significance testing of PLS and OPLS® models
CV-ANOVA for significance testing of PLS and OPLS® models
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CV-ANOVA for significance testing of PLS and OPLS® models

Eriksson, Lennart ; Trygg, Johan ; Wold, Svante

Journal of chemometrics, 2008-11, Vol.22 (11-12), p.594-600 [Periódico revisado por pares]

Chichester, UK: John Wiley & Sons, Ltd

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5
Haralick texture features from apparent diffusion coefficient (ADC) MRI images depend on imaging and pre-processing parameters
Haralick texture features from apparent diffusion coefficient (ADC) MRI images depend on imaging and pre-processing parameters
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Haralick texture features from apparent diffusion coefficient (ADC) MRI images depend on imaging and pre-processing parameters

Brynolfsson, Patrik ; Nilsson, David ; Torheim, Turid ; Asklund, Thomas ; Karlsson, Camilla Thellenberg ; Trygg, Johan ; Nyholm, Tufve ; Garpebring, Anders

Scientific reports, 2017-06, Vol.7 (1), p.4041-11, Article 4041 [Periódico revisado por pares]

England: Nature Publishing Group

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6
Variable influence on projection (VIP) for OPLS models and its applicability in multivariate time series analysis
Variable influence on projection (VIP) for OPLS models and its applicability in multivariate time series analysis
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Variable influence on projection (VIP) for OPLS models and its applicability in multivariate time series analysis

Galindo-Prieto, Beatriz ; Eriksson, Lennart ; Trygg, Johan

Chemometrics and intelligent laboratory systems, 2015-08, Vol.146, p.297-304 [Periódico revisado por pares]

Elsevier B.V

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7
Multiblock variable influence on orthogonal projections (MB-VIOP) for enhanced interpretation of total, global, local and unique variations in OnPLS models
Multiblock variable influence on orthogonal projections (MB-VIOP) for enhanced interpretation of total, global, local and unique variations in OnPLS models
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Multiblock variable influence on orthogonal projections (MB-VIOP) for enhanced interpretation of total, global, local and unique variations in OnPLS models

Galindo-Prieto, Beatriz ; Geladi, Paul ; Trygg, Johan

BMC bioinformatics, 2021-04, Vol.22 (1), p.176-176, Article 176 [Periódico revisado por pares]

England: BioMed Central Ltd

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8
Visualization of GC/TOF-MS-Based Metabolomics Data for Identification of Biochemically Interesting Compounds Using OPLS Class Models
Visualization of GC/TOF-MS-Based Metabolomics Data for Identification of Biochemically Interesting Compounds Using OPLS Class Models
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Visualization of GC/TOF-MS-Based Metabolomics Data for Identification of Biochemically Interesting Compounds Using OPLS Class Models

Wiklund, Susanne ; Johansson, Erik ; Sjöström, Lina ; Mellerowicz, Ewa J ; Edlund, Ulf ; Shockcor, John P ; Gottfries, Johan ; Moritz, Thomas ; Trygg, Johan

Analytical chemistry (Washington), 2008-01, Vol.80 (1), p.115-122 [Periódico revisado por pares]

United States: American Chemical Society

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9
Heterozygous colon cancer-associated mutations of SAMHD1 have functional significance
Heterozygous colon cancer-associated mutations of SAMHD1 have functional significance
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Heterozygous colon cancer-associated mutations of SAMHD1 have functional significance

Rentoft, Matilda ; Lindell, Kristoffer ; Tran, Phong ; Chabes, Anna Lena ; Buckland, Robert J. ; Watt, Danielle L. ; Marjavaara, Lisette ; Nilsson, Anna Karin ; Melin, Beatrice ; Trygg, Johan ; Johansson, Erik ; Chabes, Andrei

Proceedings of the National Academy of Sciences - PNAS, 2016-04, Vol.113 (17), p.4723-4728 [Periódico revisado por pares]

United States: National Academy of Sciences

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10
Orthogonal projections to latent structures (O-PLS)
Orthogonal projections to latent structures (O-PLS)
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Orthogonal projections to latent structures (O-PLS)

Trygg, Johan ; Wold, Svante

Journal of chemometrics, 2002-03, Vol.16 (3), p.119-128 [Periódico revisado por pares]

Chichester, UK: John Wiley & Sons, Ltd

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