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MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis
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MicroScope: an integrated platform for the annotation and exploration of microbial gene functions through genomic, pangenomic and metabolic comparative analysis

Vallenet, David ; Calteau, Alexandra ; Dubois, Mathieu ; Amours, Paul ; Bazin, Adelme ; Beuvin, Mylène ; Burlot, Laura ; Bussell, Xavier ; Fouteau, Stéphanie ; Gautreau, Guillaume ; Lajus, Aurélie ; Langlois, Jordan ; Planel, Rémi ; Roche, David ; Rollin, Johan ; Rouy, Zoe ; Sabatet, Valentin ; Médigue, Claudine

Nucleic acids research, 2020-01, Vol.48 (D1), p.D579-D589 [Periódico revisado por pares]

England: Oxford University Press

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A community resource for paired genomic and metabolomic data mining

Michelle A. Schorn Stefan Verhoeven; Lars Ridder; Florian Huber; Deepa D. A Acharya; Alexander A Aksenov; Gajender Aleti; Jamshid Amiri Moghaddam; Allegra T Aron; Saefuddin Aziz; Anelize Bauermeister; Katherine D Bauman; Martin Baunach; Christine Beemelmanns; J. Michael Beman; María Victoria Berlanga Clavero; Alex A Blacutt; Helge B Bode; Anne Boullie; Asker Brejnrod; Tim S Bugni; Alexandra Calteau; Liu Cao; Víctor J Carrión; Raquel Castelo Branco; Shaurya Chanana; Alexander B Chase; Marc G Chevrette; Leticia Veras Costa Lotufo; Jason M Crawford; Cameron R Currie; Bart Cuypers; Tam Dang; Tristan de Rond; Alyssa M Demko; Elke Dittmann; Chao Du; Christopher Drozd; Jean-Claude Dujardin; Rachel J Dutton; Ann Edlund; David P Fewer; Neha Garg; Julia M Gauglitz; Emily C Gentry; Lena Gerwick; Evgenia Glukhov; Harald Gross; Muriel Gugger; Dulce G. Guillén Matus; Eric J. N Helfrich; Benjamin-Florian Hempel; Jae-Seoun Hur; Marianna Iorio; Paul R Jensen; Kyo Bin Kang; Leonard Kaysser; Neil L Kelleher; Chung Sub Kim; Ki Hyun Kim; Irina Koester; Gabriele M König; Tiago Leao; Seoung Rak Lee; Yi-Yuan Lee; Xuanji Li; Jessica C Little Maloney,Katherine N.; Daniel Männle; Christian Martin H.; Andrew C McAvoy; Willam W Metcalf; Hosein Mohimani; Carlos Molina Santiago; Bradley S Moore; Michael W Mullowney; Mitchell Muskat; Louis Félix Nothias; Ellis C O’Neill; Elizabeth I Parkinson; Daniel Petras; Jörn Piel; Emily C Pierce; Karine Pires; Raphael Reher; Diego Romero; M. Caroline Roper; Michael Rust; Hamada Saad; Carmen Saenz; Laura M Sanchez; Søren Johann Sørensen; Margherita Sosio; Roderich D Süssmuth; Douglas Sweeney; Kapil Tahlan; Regan J Thomson; Nicholas J Tobias; Amaro Emiliano Trindade Silva; Gilles P. van Wezel; Mingxun Wang; Kelly C Weldon; Fan Zhang; Nadine Ziemert; Katherine R Duncan; Max Crüsemann; Simon Rogers; Pieter C Dorrestein; Marnix H Medema; Justin J. J. van der Hooft

Nature Chemical Biology London 8 p., 2021

London 2021

Item não circula. Consulte sua biblioteca.(Acessar)

3
MicroScope in 2017: an expanding and evolving integrated resource for community expertise of microbial genomes
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Artigo
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MicroScope in 2017: an expanding and evolving integrated resource for community expertise of microbial genomes

Vallenet, David ; Calteau, Alexandra ; Cruveiller, Stéphane ; Gachet, Mathieu ; Lajus, Aurélie ; Josso, Adrien ; Mercier, Jonathan ; Renaux, Alexandre ; Rollin, Johan ; Rouy, Zoe ; Roche, David ; Scarpelli, Claude ; Médigue, Claudine

Nucleic acids research, 2017-01, Vol.45 (D1), p.D517-D528 [Periódico revisado por pares]

England: Oxford University Press

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4
MicroScope--an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data
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MicroScope--an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data

Vallenet, David ; Belda, Eugeni ; Calteau, Alexandra ; Cruveiller, Stéphane ; Engelen, Stefan ; Lajus, Aurélie ; Le Fèvre, François ; Longin, Cyrille ; Mornico, Damien ; Roche, David ; Rouy, Zoé ; Salvignol, Gregory ; Scarpelli, Claude ; Thil Smith, Adam Alexander ; Weiman, Marion ; Médigue, Claudine

Nucleic acids research, 2013-01, Vol.41 (Database issue), p.D636-D647 [Periódico revisado por pares]

England: Oxford University Press

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5
PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph
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PPanGGOLiN: Depicting microbial diversity via a partitioned pangenome graph

Gautreau, Guillaume ; Bazin, Adelme ; Gachet, Mathieu ; Planel, Rémi ; Burlot, Laura ; Dubois, Mathieu ; Perrin, Amandine ; Médigue, Claudine ; Calteau, Alexandra ; Cruveiller, Stéphane ; Matias, Catherine ; Ambroise, Christophe ; Rocha, Eduardo P C ; Vallenet, David Ouzounis, Christos A.

PLoS computational biology, 2020-03, Vol.16 (3), p.e1007732-e1007732 [Periódico revisado por pares]

United States: Public Library of Science

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6
Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria
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Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria

Ficko-Blean, Elizabeth ; Préchoux, Aurélie ; Thomas, François ; Rochat, Tatiana ; Larocque, Robert ; Zhu, Yongtao ; Stam, Mark ; Génicot, Sabine ; Jam, Murielle ; Calteau, Alexandra ; Viart, Benjamin ; Ropartz, David ; Pérez-Pascual, David ; Correc, Gaëlle ; Matard-Mann, Maria ; Stubbs, Keith A ; Rogniaux, Hélène ; Jeudy, Alexandra ; Barbeyron, Tristan ; Médigue, Claudine ; Czjzek, Mirjam ; Vallenet, David ; McBride, Mark J ; Duchaud, Eric ; Michel, Gurvan

Nature communications, 2017-11, Vol.8 (1), p.1685-17, Article 1685 [Periódico revisado por pares]

England: Nature Publishing Group

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7
Phylum-wide comparative genomics unravel the diversity of secondary metabolism in Cyanobacteria
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Artigo
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Phylum-wide comparative genomics unravel the diversity of secondary metabolism in Cyanobacteria

Calteau, Alexandra ; Fewer, David P ; Latifi, Amel ; Coursin, Thérèse ; Laurent, Thierry ; Jokela, Jouni ; Kerfeld, Cheryl A ; Sivonen, Kaarina ; Piel, Jörn ; Gugger, Muriel

BMC genomics, 2014-11, Vol.15 (1), p.977-977, Article 977 [Periódico revisado por pares]

England: BioMed Central Ltd

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8
A tribute to disorder in the genome of the bloom-forming freshwater cyanobacterium Microcystis aeruginosa
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A tribute to disorder in the genome of the bloom-forming freshwater cyanobacterium Microcystis aeruginosa

Humbert, Jean-François ; Barbe, Valérie ; Latifi, Amel ; Gugger, Muriel ; Calteau, Alexandra ; Coursin, Therese ; Lajus, Aurélie ; Castelli, Vanina ; Oztas, Sophie ; Samson, Gaëlle ; Longin, Cyrille ; Medigue, Claudine ; de Marsac, Nicole Tandeau Brochier-Armanet, Celine

PloS one, 2013-08, Vol.8 (8), p.e70747-e70747 [Periódico revisado por pares]

United States: Public Library of Science

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9
panRGP: a pangenome-based method to predict genomic islands and explore their diversity
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panRGP: a pangenome-based method to predict genomic islands and explore their diversity

Bazin, Adelme ; Gautreau, Guillaume ; Médigue, Claudine ; Vallenet, David ; Calteau, Alexandra

Bioinformatics, 2020-12, Vol.36 (Supplement_2), p.i651-i658 [Periódico revisado por pares]

England: Oxford University Press

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10
A metabolic model for members of the genus Tetrasphaera involved in enhanced biological phosphorus removal
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A metabolic model for members of the genus Tetrasphaera involved in enhanced biological phosphorus removal

Kristiansen, Rikke ; Nguyen, Hien Thi Thu ; Saunders, Aaron Marc ; Nielsen, Jeppe Lund ; Wimmer, Reinhard ; Le, Vang Quy ; McIlroy, Simon Jon ; Petrovski, Steve ; Seviour, Robert J ; Calteau, Alexandra ; Nielsen, Kåre Lehmann ; Nielsen, Per Halkjær

The ISME Journal, 2013-03, Vol.7 (3), p.543-554 [Periódico revisado por pares]

England: Nature Publishing Group

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Deste Autor:

  1. Kang, K
  2. Dittmann, E
  3. Hempel, B
  4. Verhoeven, S
  5. McAvoy, A

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