Idioma:

Twelve years of SAMtools and BCFtools

Danecek, Petr ; Bonfield, James K ; Liddle, Jennifer ; Marshall, John ; Ohan, Valeriu ; Pollard, Martin O ; Whitwham, Andrew ; Keane, Thomas ; McCarthy, Shane A ; Davies, Robert M ; Li, Heng

Gigascience, 2021-02, Vol.10 (2) [Periódico revisado por pares]

Texto completo disponível

Citações Citado por

Título:
Twelve years of SAMtools and BCFtools
Autor: Danecek, Petr ; Bonfield, James K ; Liddle, Jennifer ; Marshall, John ; Ohan, Valeriu ; Pollard, Martin O ; Whitwham, Andrew ; Keane, Thomas ; McCarthy, Shane A ; Davies, Robert M ; Li, Heng
Assuntos: Technical Note
É parte de: Gigascience, 2021-02, Vol.10 (2)
Notas: ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
Descrição: SAMtools and BCFtools are widely used programs for processing and analysing high-throughput sequencing data. They include tools for file format conversion and manipulation, sorting, querying, statistics, variant calling, and effect analysis amongst other methods. The first version appeared online 12 years ago and has been maintained and further developed ever since, with many new features and improvements added over the years. The SAMtools and BCFtools packages represent a unique collection of tools that have been used in numerous other software projects and countless genomic pipelines. Both SAMtools and BCFtools are freely available on GitHub under the permissive MIT licence, free for both non-commercial and commercial use. Both packages have been installed >1 million times via Bioconda. The source code and documentation are available from https://www.htslib.org.
Editor: United States: Oxford University Press
Idioma: Inglês

Links

Voltar para lista de resultados