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The Genome Sequence of Taurine Cattle: A Window to Ruminant Biology and Evolution

Elsik, Christine G.; Tellam, Ross L.; Worley, Kim C.; Gibbs, Richard A.; Abatepaulo, Antonio R. R.; Abbey, Colette A.; Adelson, David L.; Aerts, Jan; Ahola, Virpi; Alexander, Lee; Alioto, Tyler; Almeida, Iassudara G.; Amadio, Ariel F.; Anatriello, Elen; Antonarakis, Stylianos E.; Anzola, Juan M.; Astashyn, Alex; Bahadue, Suria M.; Baldwin, Cynthia L.; Barris, Wes; Baxter, Rebecca; Bell, Stephanie Nicole; Bennett, Anna K.; Bennett, Gary L.; Biase, Fernando H.; Boldt, Clayton R.; Bradley, Daniel G.; Brinkman, Fiona S. L.; Brinkmeyer-Langford, Candice L.; Brown, Wendy C.; Brownstein, Michael J.; Buhay, Christian; Caetano, Alexandre R.; Camara, Francisco; Carroll, Jeffrey A.; Carvalho, Wanessa A.; Casey, Theresa; Cervelatti, Elaine P.; Chack, Joseph; Chacko, Elsa; Chandrabose, Mimi M.; Chapin, Jennifer E.; Chapple, Charles E.; Chen, Hsiu-Chuan; Chen, Lin; Cheng, Ye; Cheng, Ze; Childers, Christopher P.; Chitko-Mckown, Carol G.; Chiu, Readman; Choi, Jungwoo; Chrast, Jacqueline; Colley, Adam J.; Connelley, Tomothy; Cree, Andy; Curry, Stacey; Dalrymple, Brian; Dao, Marvin Diep; Davis, Clay; Oliveira, Carlo J. F. De; Santos, Isabel K. F. De Miranda; Campos, Tatiana A. De; Deobald, Heather; Devinoy, Eve; Dickins, C. Michael; Yan, Ding; Dinh, Huyen H.; Donato, Marcos De; Donohue, Kaitlin E.; Donthu, Ravikiran; Dovc, Peter; Dugan-Rocha, Shannon; Durbin, K. James; Eberlein, Annett; Edgar, Robert C.; Egan, Amy; Eggen, Andre; Eichler, Evan E.; Elhaik, Eran; Ellis, Shirley A.; Elnitski, Laura; Ermolaeva, Olga; Eyras, Eduardo; Fitzsimmons, Carolyn J.; Fowler, Gerald R.; Franzin, Alessandra M.; Fritz, Krista; Gabisi, Ramatu Ayiesha; Garcia, Gustavo R.; Garcia, Jose Fernando; Genini, Sem; Gerlach, Daniel; German, J. Bruce; Gilbert, James G. R.; Gill, Clare A.; Gladney, Cody J.; Glass, Elizabeth J.; Goodell, Jason; Grant, Jason R.; Graur, Dan; Greaser, Marion L.; Green, Jonathan A.; Green, Ronnie D.; Guan, Leluo; Guigo, Roderic; Hadsell, Darryl L.; Hagen, Darren E.; Hakimov, Hatam A.; Halgren, Rob; Hamernik, Debora L.; Hamilton, Cerissa; Harhay, Gregory P.; Harrow, Jennifer L.; Hart, Elizabeth A.; Hastings, Nicola; Havlak, Paul; Henrichsen, Charlotte N.; Hernandez, Judith; Hernandez, Marta; Herzig, Carolyn T. A.; Hiendleder, Stefan G.; Hines, Sandra; Hitchens, Matthew Edward; Hlavina, Wratko; Hobbs, Matthew; Holder, Michael; Holt, Robert A.; Hu, Zhi-Liang; Hume, Jennifer; Iivanainen, Antti; Ingham, Aaron; Iso-Touru, Terhi; Jamis, Catherine; Jann, Oliver; Jensen, Kirsty; Jhangiani, Shalini N.; Jiang, Huaiyang; Johnson, Angela Jolivet; Jones, Steven J. M.; Joshi, Vandita; Junier, Thomas; Kapetis, Dimos; Kappes, Steve M.; Kapustin, Yuri; Keele, John W.; Kent, Matthew P.; Kerr, Tovah; Khalil, Sari S.; Khatib, Hasan; Kiryutin, Boris; Kitts, Paul; Kokocinski, Felix; Kolbehdari, Davood; Kovar, Christie L.; Kriventseva, Evgenia V.; Kumar, Charu G.; Kumar, Dinesh; Lahmers, Kevin K.; Landrum, Melissa; Larkin, Denis M.; Lau, Lilian P. L.; Leach, Richard; Lee, Justin C. M.; Lee, Sandra; Lemay, Danielle G.; Lewin, Harris A.; Lewis, Lora R.; Li, Changxi; Lien, Sigbjorn; Liu, George E.; Liu, Yih-Shin; Liu, Yue; Logan, Krystin M.; Lopez, John; Lozado, Ryan J.; Lutzow, Ylva Strandberg; Lynn, David J.; Macneil, Michael D.; Maglott, Donna; Malinverni, Roberto; Maqbool, Nauman J.; Marques, Elisa; Marra, Marco A.; Martin, William F.; Martins, Natalia F.; Maruyama, Sandra R.; Matukumalli, Lakshmi K.; Mazza, Raffaele; Mcewan, John C.; Mckay, Stephanie D.; Mclean, Kim L.; Mcwilliam, Sean; Medrano, Juan F.; Memili, Erdogan; Moen, Charles; Molenaar, Adrian J.; Moore, Stephen S.; Moore, Richard; More, Daniela D.; Moreno, Barbara T.; Morgan, Margaret B.; Muntean, Carl T.; Muzny, Donna M.; Nandakumar, Hari P.; Nazareth, Lynne V.; Nguyen, Ngoc Bich; Nicholas, Frank W.; Nogueira, Marcelo F. G.; Okwuonu, Geoffrey O.; Olsaker, Ingrid; Pant, Sameer D.; Panzitta, Francesca; Pastor, Rosemeire C. P.; Patel, Bella Mayurkumar; Payne, Gemma M.; Plass, Mireya; Poli, Mario A.; Poslusny, Nathan; Pruitt, Kim; Pu, Ling-Ling; Qin, Xiang; Rachagani, Satyanarayana; Raison, Joy M.; Ranganathan, Shoba; Ratnakumar, Abhirami; Razpet, Andrej; Reecy, James; Reese, Justin T.; Ren, Yanru; Reymond, Alexandre; Riggs, Penny K.; Rijnkels, Monique; Rincon, Gonzalo; Roberts, Andy; Rodriguez-Osorio, Nelida; Rodriguez-Zas, Sandra L.; Romero, Natasha E.; Rosenwald, Anne; Ruiz, San Juana; Sabo, Aniko; Salih, Hanni; Sando, Lillian; Santibanez, Jireh; Sapojnikov, Victor; Schein, Jacqueline E.; Schmutz, Sheila M.; Schnabel, Robert D.; Schook, Lawrence; Searle, Stephen M.; Seo, Seongwon; Shen, Yufeng; Shen, Libing; Sherman, Laura; Skow, Loren C.; Smith, Timothy; Snelling, Warren M.; Sodergren, Erica; Solovyev, Victor; Song, Henry; Song, Jiuzhou; Sonstegard, Tad S.; Southey, Bruce R.; Souvorov, Alexandre; Spurlock, Diane; Steffen, David; Stone, Roger T.; Stothard, Paul; Sugimoto, Yoshikazu; Sweedler, Jonathan V.; Takasuga, Akiko; Tammen, Imke; Taniguchi, Masaaki; Taylor, Jeremy F.; Telugu, Bhanu Prakash V. L.; Ucla, Catherine; Urbanski, Jennifer M.; Utsunomiya, Yuri T.; Van, Curtis P.; Vattathil, Selina; Verschoor, Chris P.; Waardenberg, Ashley J.; Walker, Angela; Wang, Zhiquan; Ward, Robert; Warren, James T.; Waterman, Richard C.; Weikard, Rosemarie; Weinstock, George M.; Welsh Jr., Thomas H.; Wheeler, David A.; Wheeler, Thomas T.; White, Stephen N.; Whiteside, Matthew D.; Wilczek-Boney, Katarzyna; Williams, John L.; Williams Jr., Rex Lee; Wilming, Laurens G.; Womack, James; Wright, Rita A.; Wunderlich, Kris R.; Wyss, Carine; Yang, Mary Q.; Yang, Jianqi; Zdobnov, Evgeny M.; Zhang, Jingkun; Zhao, Feng-Qi; Zhu, Bin; Bovine Genome Sequencing And Analysis Consortium Universidade De São Paulo

SCIENCE, v.324, n.5926, p.522-528, 2009

AMER ASSOC ADVANCEMENT SCIENCE 2009

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Obligate biotrophy features unraveled by the genomic analysis of rust fungi

Duplessis, Sébastien ; Cuomo, Christina A ; Lin, Yao-Cheng ; Aerts, Andrea ; Tisserant, Emilie ; Veneault-Fourrey, Claire ; Joly, David L ; Hacquard, Stéphane ; Amselem, Joëlle ; Cantarel, Brandi L ; Chiu, Readman ; Coutinho, Pedro M ; Feau, Nicolas ; Field, Matthew ; Frey, Pascal ; Gelhaye, Eric ; Goldberg

Proceedings of the National Academy of Sciences of the United States of America, 31 May 2011, Vol.108(22), pp.9166-71 [Periódico revisado por pares]

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Comprehensive and Integrative Genomic Characterization of Hepatocellular Carcinoma

Ally, Adrian ; Balasundaram, Miruna ; Carlsen, Rebecca ; Chuah, Eric ; Clarke, Amanda ; Dhalla, Noreen ; Holt, Robert A ; Jones, Steven J.M ; Lee, Darlene ; Ma, Yussanne ; Marra, Marco A ; Mayo, Michael ; Moore, Richard A ; Mungall, Andrew J ; Schein, Jacqueline E ; Sipahimalani, Payal ; Tam, Angela ; Thiessen, Nina ; Cheung, Dorothy ; Wong, Tina The Cancer Genome Atlas Research Network (Corporate Author)

Cell, 15 June 2017, Vol.169(7), pp.1327-1341.e23 [Periódico revisado por pares]

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A high-resolution whole-genome cattle-human comparative map reveals details of mammalian chromosome evolution

Everts-Van Der Wind, Annelie ; Larkin, Denis M ; Green, Cheryl A ; Elliott, Janice S ; Olmstead, Colleen A ; Chiu, Readman ; Schein, Jacqueline E ; Marra, Marco A ; Womack, James E ; Lewin, Harris A

Proceedings of the National Academy of Sciences of the United States of America, 20 December 2005, Vol.102(51), pp.18526-31 [Periódico revisado por pares]

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Homologous Recombination Deficiency and Platinum-Based Therapy Outcomes in Advanced Breast Cancer

Zhao, Eric Y ; Shen, Yaoqing ; Pleasance, Erin ; Kasaian, Katayoon ; Leelakumari, Sreeja ; Jones, Martin ; Bose, Pinaki ; Ch'Ng, Carolyn ; Reisle, Caralyn ; Eirew, Peter ; Corbett, Richard ; Mungall, Karen L ; Thiessen, Nina ; Ma, Yussanne ; Schein, Jacqueline E ; Mungall, Andrew J ; Zhao, Yongjun ; Moore, Richard A ; Den Brok

Clinical cancer research : an official journal of the American Association for Cancer Research, 15 December 2017, Vol.23(24), pp.7521-7530 [Periódico revisado por pares]

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Divergent clonal selection dominates medulloblastoma at recurrence

A. Sorana Morrissy ; Livia Garzia ; David J. H. Shih ; Scott Zuyderduyn ; Xi Huang ; Patryk Skowron ; Marc Remke ; Florence M. G. Cavalli ; Vijay Ramaswamy ; Patricia E. Lindsay ; Salomeh Jelveh ; Laura K. Donovan ; Xin Wang ; Betty Luu ; Kory Zayne ; Yisu Li ; Chelsea Mayoh ; Nina Thiessen ; Eloi Mercier ; Karen L. Mungall ; Yusanne Ma ; Kane Tse ; Thomas Zeng ; Karey Shumansky ; Andrew J. L. Roth ; Sohrab Shah ; Hamza Farooq ; Noriyuki Kijima ; Borja L. Holgado ; John J. Y. Lee ; Stuart Matan-Lithwick ; Jessica Liu ; Stephen C. Mack ; Alex Manno ; K. A. Michealraj ; Carolina Nor ; John Peacock ; Lei Qin ; Juri Reimand ; Adi Rolider ; Yuan Y. Thompson ; Xiaochong Wu ; Trevor Pugh ; Adrian Ally ; Mikhail Bilenky ; Yaron S. N. Butterfield ; Rebecca Carlsen ; Young Cheng ; Eric Chuah ; Richard D. Corbett ; Noreen Dhalla ; An He ; Darlene Lee ; Haiyan I. Li ; William Long ; Michael Mayo ; Patrick Plettner ; Jenny Q. Qian ; Jacqueline E. Schein ; Angela Tam ; Tina Wong ; Inanc Birol ; Yongjun Zhao ; Claudia C. Faria ; José Pimentel ; Sofia Nunes ; Tarek Shalaby ; Michael Grotzer ; Ian F. Pollack ; Ronald L. Hamilton ; Xiao-Nan Li ; Anne E. Bendel ; Daniel W. Fults ; Andrew W. Walter ; Toshihiro Kumabe ; Teiji Tominaga ; V. Peter Collins ; Yoon-Jae Cho ; Caitlin Hoffman ; David Lyden ; Jeffrey H. Wisoff ; James H. Garvin ; Duncan S. Stearns ; Luca Massimi ; Ulrich Schüller ; Jaroslav Sterba ; Karel Zitterbart ; Stephanie Puget ; Olivier Ayrault ; Sandra E. Dunn ; Daniela P. C. Tirapelli ; Carlos G. Carlotti ; Helen Wheeler ; Andrew R. Hallahan ; Wendy Ingram ; Tobey J. Macdonald ; Jeffrey J. Olson ; Erwin G. Van Meir ; Ji-Yeoun Lee ; Kyu-Chang Wang ; Seung-Ki Kim ; Byung-Kyu Cho ; Torsten Pietsch ; Gudrun Fleischhack ; Stephan Tippelt ; Young Shin Ra ; Simon Bailey ; Janet C. Lindsey ; Steven C. Clifford ; Charles G. Eberhart ; Michael K. Cooper ; Roger J. Packer ; Maura Massimino ; Maria Luisa Garre ; Ute Bartels ; Uri Tabori ; Cynthia E. Hawkins ; Peter Dirks ; Eric Bouffet ; James T. Rutka ; Robert J. Wechsler-Reya ; William A. Weiss ; Lara S. Collier ; Adam J. Dupuy ; Andrey Korshunov ; David T. W. Jones ; Marcel Kool ; Paul A. Northcott ; Stefan M. Pfister ; David A. Largaespada ; Andrew J. Mungall ; Richard A. Moore ; Nada Jabado ; Gary D. Bader ; Steven J. M. Jones ; David Malkin ; Marco A. Marra ; Michael D. Taylor

Nature, 2016, Vol.529(7586), p.351 [Periódico revisado por pares]

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Comprehensive molecular characterization of gastric adenocarcinoma

Bass, Adam J. ; Thorsson, Vesteinn ; Shmulevich, Ilya ; Reynolds, Sheila M. ; Miller, Michael ; Bernard, Brady ; Hinoue, Toshinori ; Laird, Peter W. ; Curtis, Christina ; Shen, Hui ; Weisenberger, Daniel J. ; Schultz, Nikolaus ; Shen, Ronglai ; Weinhold, Nils ; Kelsen, David P. ; Bowlby, Reanne ; Chu, Andy ; Kasaian, Katayoon ; Mungall, Andrew J. ; Robertson, A. Gordon ; Sipahimalani, Payal ; Cherniack, Andrew ; Getz, Gad ; Liu, Yingchun ; Noble, Michael S. ; Pedamallu, Chandra ; Sougnez, Carrie ; Taylor-Weiner, Amaro ; Akbani, Rehan ; Lee, Ju-Seog ; Liu, Wenbin ; Mills, Gordon B. ; Yang, Da ; Zhang, Wei ; Pantazi, Angeliki ; Parfenov, Michael ; Gulley, Margaret ; Piazuelo, M. Blanca ; Schneider, Barbara G. ; Kim, Jihun ; Boussioutas, Alex ; Sheth, Margi ; Demchok, John A. ; Rabkin, Charles S. ; Willis, Joseph E. ; Ng, Sam ; Garman, Katherine ; Beer, David G. ; Pennathur, Arjun ; Raphael, Benjamin J. ; Wu, Hsin-Ta ; Odze, Robert ; Kim, Hark K. ; Bowen, Jay ; Leraas, Kristen M. ; Lichtenberg, Tara M. ; Weaver, Stephanie ; Mclellan, Michael ; Wiznerowicz, Maciej ; Sakai, Ryo ; Lawrence, Michael S. ; Cibulskis, Kristian ; Lichtenstein, Lee ; Fisher, Sheila ; Gabriel, Stacey B. ; Lander, Eric S. ; Ding, Li ; Niu, Beifang ; Ally, Adrian ; Balasundaram, Miruna ; Birol, Inanc ; Brooks, Denise ; Butterfield, Yaron S. N. ; Carlsen, Rebecca ; Chu, Justin ; Chuah, Eric ; Chun, Hye-Jung E. ; Clarke, Amanda ; Dhalla, Noreen ; Guin, Ranabir ; Holt, Robert A. ; Jones, Steven J.M. ; Lee, Darlene ; Li, Haiyan A. ; Lim, Emilia ; Ma, Yussanne ; Marra, Marco A. ; Mayo, Michael ; Moore, Richard A. ; Mungall, Karen L. ; Nip, Ka Ming ; Schein, Jacqueline E. ; Tam, Angela ; Thiessen, Nina ; Beroukhim, Rameen ; Carter, Scott L. ; Cherniack, Andrew D. ; Cho, Juok ; Dicara, Daniel ; Frazer, Scott ; Gehlenborg, Nils ; Heiman, David I. ; Jung, Joonil ; Kim, Jaegil ; Lin, Pei ; Meyerson, Matthew ; Ojesina, Akinyemi I. ; Pedamallu, Chandra Sekhar ; Saksena, Gordon ; Schumacher, Steven E. ; Stojanov, Petar ; Tabak, Barbara ; Voet, Doug ; Rosenberg, Mara ; Zack, Travis I. ; Zhang, Hailei ; Zou, Lihua ; Protopopov, Alexei ; Santoso, Netty ; Lee, Semin ; Zhang, Jianhua ; Mahadeshwar, Harshad S. ; Tang, Jiabin ; Ren, Xiaojia ; Seth, Sahil ; Yang, Lixing ; Xu, Andrew W. ; Song, Xingzhi ; Xi, Ruibin ; Bristow, Christopher A. ; Hadjipanayis, Angela ; Seidman, Jonathan ; Chin, Lynda ; Park, Peter J. ; Kucherlapati, Raju ; Ling, Shiyun ; Rao, Arvind ; Weinstein, John N. ; Kim, Sang-Bae ; Lu, Yiling ; Mills, Gordon ; Bootwalla, Moiz S. ; Lai, Phillip H. ; Triche, Timothy ; Van Den Berg, David J. ; Baylin, Stephen B. ; Herman, James G. ; Murray, Bradley A. ; Askoy, B. Arman ; Ciriello, Giovanni ; Dresdner, Gideon ; Gao, Jianjiong ; Gross, Benjamin ; Jacobsen, Anders ; Lee, William ; Ramirez, Ricardo ; Sander, Chris ; Senbabaoglu, Yasin ; Sinha, Rileen ; Sumer, S. Onur ; Sun, Yichao ; Thorsson, Vésteinn ; Iype, Lisa ; Kramer, Roger W. ; Kreisberg, Richard ; Rovira, Hector ; Tasman, Natalie ; Ng, Santa Cruz Sam ; Haussler, David ; Stuart, Josh M. ; Verhaak, Roeland G.W. ; Leiserson, Mark D. M. ; Taylor, Barry S. ; Black, Aaron D. ; Carney, Julie Ann ; Gastier-Foster, Julie M. ; Helsel, Carmen ; Mcallister, Cynthia ; Ramirez, Nilsa C. ; Tabler, Teresa R. ; Wise, Lisa ; Zmuda, Erik ; Penny, Robert ; Crain, Daniel ; Gardner, Johanna ; Lau, Kevin ; Curely, Erin ; Mallery, David ; Morris, Scott ; Paulauskis, Joseph ; Shelton, Troy ; Shelton, Candace ; Sherman, Mark ; Benz, Christopher ; Lee, Jae-Hyuk ; Fedosenko, Konstantin ; Manikhas, Georgy ; Potapova, Olga ; Voronina, Olga ; Belyaev, Smitry ; Dolzhansky, Oleg ; Rathmell, W. Kimryn ; Brzezinski, Jakub ; Ibbs, Matthew ; Korski, Konstanty ; Kycler, Witold ; Łaÿniak, Radoslaw ; Leporowska, Ewa ; Mackiewicz, Andrzej ; Murawa, Dawid ; Murawa, Pawel ; Spychała, Arkadiusz ; Suchorska, Wiktoria M. ; Tatka, Honorata ; Teresiak, Marek ; Abdel-Misih, Raafat ; Bennett, Joseph ; Brown, Jennifer ; Iacocca, Mary ; Rabeno, Brenda ; Kwon, Sun-Young ; Kemkes, Ariane ; Curley, Erin ; Alexopoulou, Iakovina ; Engel, Jay ; Bartlett, John ; Albert, Monique ; Park, Do-Youn ; Dhir, Rajiv ; Luketich, James ; Landreneau, Rodney ; Janjigian, Yelena Y. ; Cho, Eunjung ; Ladanyi, Marc ; Tang, Laura ; Mccall, Shannon J. ; Park, Young S. ; Cheong, Jae-Ho ; Ajani, Jaffer ; Camargo, M. Constanza ; Alonso, Shelley ; Ayala, Brenda ; Jensen, Mark A. ; Pihl, Todd ; Raman, Rohini ; Walton, Jessica ; Wan, Yunhu ; Eley, Greg ; Mills Shaw, Kenna R. ; Tarnuzzer, Roy ; Wang, Zhining ; Yang, Liming ; Zenklusen, Jean Claude ; Davidsen, Tanja ; Hutter, Carolyn M. ; Sofia, Heidi J. ; Burton, Robert ; Chudamani, Sudha ; Liu, Jia

Bass, A. J., V. Thorsson, I. Shmulevich, S. M. Reynolds, M. Miller, B. Bernard, T. Hinoue, et al. 2014. “Comprehensive molecular characterization of gastric adenocarcinoma.” Nature 513 (7517): 202-209. doi:10.1038/nature13480. http://dx.doi.org/10.1038/nature13480. [Periódico revisado por pares]

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LaneRuler: Automated Lane Tracking for DNA Electrophoresis Gel Images

Wong, Richard T F ; Flibotte, Stephane ; Corbett, Richard ; Saeedi, Parvaneh ; Jones, Steven J M ; Marra, Marco A ; Schein, Jacqueline E ; Birol, İnanç

IEEE Transactions on Automation Science and Engineering, July 2010, Vol.7(3), pp.706-708 [Periódico revisado por pares]

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Molecular etiology of an indolent lymphoproliferative disorder determined by whole-genome sequencing

Parker, Jeremy D K ; Shen, Yaoqing ; Pleasance, Erin ; Li, Yvonne ; Schein, Jacqueline E ; Zhao, Yongjun ; Moore, Richard ; Wegrzyn-Woltosz, Joanna ; Savage, Kerry J ; Weng, Andrew P ; Gascoyne, Randy D ; Jones, Steven ; Marra, Marco ; Laskin, Janessa ; Karsan, Aly

Cold Spring Harbor molecular case studies, March 2016, Vol.2(2), pp.a000679 [Periódico revisado por pares]

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Putative BRAF activating fusion in a medullary thyroid cancer

Kasaian, Katayoon ; Wiseman, Sam M ; Walker, Blair A ; Schein, Jacqueline E ; Hirst, Martin ; Moore, Richard A ; Mungall, Andrew J ; Marra, Marco A ; Jones, Steven J M

Cold Spring Harbor molecular case studies, March 2016, Vol.2(2), pp.a000729 [Periódico revisado por pares]

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Deste Autor:

  1. Marra, Marco A
  2. Schein, Jacqueline E
  3. Ma, Yussanne
  4. Kasaian, Katayoon
  5. Mayo, Michael

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