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1
Insights from a workplace SARS-CoV-2 specimen collection program, with genomes placed into global sequence phylogeny
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Insights from a workplace SARS-CoV-2 specimen collection program, with genomes placed into global sequence phylogeny

Leiser, Owen P ; Auberry, Deanna L ; Bakker, Erica ; Chrisler, Will ; Engbrecht, Kristin ; Engelmann, Heather ; Fansler, Sarah ; Gerbasi, Vincent ; Hansen, Joshua ; Hutchinson, Chelsea ; Hutchison, Janine ; Lancaster, Mary J ; Lawrence, Kathleen ; Melville, Angela ; Mobberley, Jennifer ; O'Bryon, Isabelle ; Oxford, Kristie L ; Oxford, Tessa ; Phillips, Shelby ; Rodda, Kabrena E ; Sanford, James A ; Schepmoes, Athena ; Staley, Brian E ; Terrell, Kelcey ; Victry, Kristin ; Warner, Cynthia ; Omberg, Kristin M Motayo, Babatunde Olanrewaju

PloS one, 2023-04, Vol.18 (4), p.e0285042-e0285042 [Periódico revisado por pares]

United States: Public Library of Science

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2
Whole Genome Sequence Analysis Using JSpecies Tool Establishes Clonal Relationships between Listeria monocytogenes Strains from Epidemiologically Unrelated Listeriosis Outbreaks
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Whole Genome Sequence Analysis Using JSpecies Tool Establishes Clonal Relationships between Listeria monocytogenes Strains from Epidemiologically Unrelated Listeriosis Outbreaks

Burall, Laurel S ; Grim, Christopher J ; Mammel, Mark K ; Datta, Atin R Freitag, Nancy E

PloS one, 2016-03, Vol.11 (3), p.e0150797-e0150797 [Periódico revisado por pares]

United States: Public Library of Science

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3
Tracking ebolavirus genomic drift with a resequencing microarray
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Tracking ebolavirus genomic drift with a resequencing microarray

Tiper, Irina ; Kourout, Moussa ; Lanning, Bryan ; Fisher, Carolyn ; Konduru, Krishnamurthy ; Purkayastha, Anjan ; Kaplan, Gerardo ; Duncan, Robert Das, Jishnu

PloS one, 2022-02, Vol.17 (2), p.e0263732-e0263732 [Periódico revisado por pares]

United States: Public Library of Science

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4
Developmental Pathway of the MPER-Directed HIV-1-Neutralizing Antibody 10E8
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Developmental Pathway of the MPER-Directed HIV-1-Neutralizing Antibody 10E8

Soto, Cinque ; Ofek, Gilad ; Joyce, M Gordon ; Zhang, Baoshan ; McKee, Krisha ; Longo, Nancy S ; Yang, Yongping ; Huang, Jinghe ; Parks, Robert ; Eudailey, Joshua ; Lloyd, Krissey E ; Alam, S Munir ; Haynes, Barton F ; Mullikin, James C ; Connors, Mark ; Mascola, John R ; Shapiro, Lawrence ; Kwong, Peter D Jiang, Shibo

PloS one, 2016-06, Vol.11 (6), p.e0157409 [Periódico revisado por pares]

United States: Public Library of Science

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5
TreeCluster: Clustering biological sequences using phylogenetic trees
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TreeCluster: Clustering biological sequences using phylogenetic trees

Balaban, Metin ; Moshiri, Niema ; Mai, Uyen ; Jia, Xingfan ; Mirarab, Siavash Bozdag, Serdar

PloS one, 2019-08, Vol.14 (8), p.e0221068-e0221068 [Periódico revisado por pares]

United States: Public Library of Science

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6
Machine learning using intrinsic genomic signatures for rapid classification of novel pathogens: COVID-19 case study
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Machine learning using intrinsic genomic signatures for rapid classification of novel pathogens: COVID-19 case study

Randhawa, Gurjit S ; Soltysiak, Maximillian P M ; El Roz, Hadi ; de Souza, Camila P E ; Hill, Kathleen A ; Kari, Lila Schildgen, Oliver

PloS one, 2020-04, Vol.15 (4), p.e0232391-e0232391 [Periódico revisado por pares]

United States: Public Library of Science

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7
Piphillin: Improved Prediction of Metagenomic Content by Direct Inference from Human Microbiomes
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Piphillin: Improved Prediction of Metagenomic Content by Direct Inference from Human Microbiomes

Iwai, Shoko ; Weinmaier, Thomas ; Schmidt, Brian L ; Albertson, Donna G ; Poloso, Neil J ; Dabbagh, Karim ; DeSantis, Todd Z He, Zhili

PloS one, 2016-11, Vol.11 (11), p.e0166104-e0166104 [Periódico revisado por pares]

United States: Public Library of Science

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8
Porcine circovirus 2 (PCV-2) genotype update and proposal of a new genotyping methodology
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Porcine circovirus 2 (PCV-2) genotype update and proposal of a new genotyping methodology

Franzo, Giovanni ; Segalés, Joaquim Sola, Christophe

PloS one, 2018-12, Vol.13 (12), p.e0208585-e0208585 [Periódico revisado por pares]

United States: Public Library of Science

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9
Global genetic diversity and geographical distribution of Bemisia tabaci and its bacterial endosymbionts
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Global genetic diversity and geographical distribution of Bemisia tabaci and its bacterial endosymbionts

Kanakala, Surapathrudu ; Ghanim, Murad Zhang, Youjun

PloS one, 2019-03, Vol.14 (3), p.e0213946-e0213946 [Periódico revisado por pares]

United States: Public Library of Science

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10
The vaginal microbiota: what have we learned after a decade of molecular characterization?
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The vaginal microbiota: what have we learned after a decade of molecular characterization?

van de Wijgert, Janneke H H M ; Borgdorff, Hanneke ; Verhelst, Rita ; Crucitti, Tania ; Francis, Suzanna ; Verstraelen, Hans ; Jespers, Vicky Fredricks, David N.

PloS one, 2014-08, Vol.9 (8), p.e105998-e105998 [Periódico revisado por pares]

United States: Public Library of Science

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