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Metrics for rapid quality control in RNA structure probing experiments
Metrics for rapid quality control in RNA structure probing experiments
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Metrics for rapid quality control in RNA structure probing experiments

Choudhary, Krishna ; Shih, Nathan P ; Deng, Fei ; Ledda, Mirko ; Li, Bo ; Aviran, Sharon

Bioinformatics (Oxford, England), 2016-12, Vol.32 (23), p.3575-3583 [Periódico revisado por pares]

England: Oxford University Press

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Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods
Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods
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Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods

Haas, Brian J ; Dobin, Alexander ; Li, Bo ; Stransky, Nicolas ; Pochet, Nathalie ; Regev, Aviv

Genome Biology, 2019-10, Vol.20 (1), p.213-213, Article 213 [Periódico revisado por pares]

England: BioMed Central Ltd

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3
Evaluation of de novo transcriptome assemblies from RNA-Seq data
Evaluation of de novo transcriptome assemblies from RNA-Seq data
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Evaluation of de novo transcriptome assemblies from RNA-Seq data

Li, Bo ; Fillmore, Nathanael ; Bai, Yongsheng ; Collins, Mike ; Thomson, James A ; Stewart, Ron ; Dewey, Colin N

Genome Biology (Online Edition), 2014-12, Vol.15 (12), p.553-553, Article 553 [Periódico revisado por pares]

England: BioMed Central Ltd

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4
Comparative analysis of sequencing technologies for single-cell transcriptomics
Comparative analysis of sequencing technologies for single-cell transcriptomics
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Comparative analysis of sequencing technologies for single-cell transcriptomics

Natarajan, Kedar Nath ; Miao, Zhichao ; Jiang, Miaomiao ; Huang, Xiaoyun ; Zhou, Hongpo ; Xie, Jiarui ; Wang, Chunqing ; Qin, Shishang ; Zhao, Zhikun ; Wu, Liang ; Yang, Naibo ; Li, Bo ; Hou, Yong ; Liu, Shiping ; Teichmann, Sarah A

Genome Biology, 2019-04, Vol.20 (1), p.70-70, Article 70 [Periódico revisado por pares]

England: BioMed Central Ltd

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5
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
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RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

Li, Bo ; Dewey, Colin N

BMC bioinformatics, 2011-08, Vol.12 (1), p.323-323, Article 323 [Periódico revisado por pares]

England: BioMed Central Ltd

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6
RNA-Seq gene expression estimation with read mapping uncertainty
RNA-Seq gene expression estimation with read mapping uncertainty
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RNA-Seq gene expression estimation with read mapping uncertainty

Li, Bo ; Ruotti, Victor ; Stewart, Ron M. ; Thomson, James A. ; Dewey, Colin N.

Bioinformatics, 2010-02, Vol.26 (4), p.493-500 [Periódico revisado por pares]

Oxford: Oxford University Press

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7
Imputing dropouts for single-cell RNA sequencing based on multi-objective optimization
Imputing dropouts for single-cell RNA sequencing based on multi-objective optimization
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Imputing dropouts for single-cell RNA sequencing based on multi-objective optimization

Jin, Ke ; Li, Bo ; Yan, Hong ; Zhang, Xiao-Fei Mathelier, Anthony

Bioinformatics, 2022-06, Vol.38 (12), p.3222-3230 [Periódico revisado por pares]

England: Oxford University Press

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8
A Genome-wide View of Transcriptome Dynamics During Early Spike Development in Bread Wheat
A Genome-wide View of Transcriptome Dynamics During Early Spike Development in Bread Wheat
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A Genome-wide View of Transcriptome Dynamics During Early Spike Development in Bread Wheat

Li, Yongpeng ; Fu, Xing ; Zhao, Meicheng ; Zhang, Wei ; Li, Bo ; An, Diaoguo ; Li, Junming ; Zhang, Aimin ; Liu, Renyi ; Liu, Xigang

Scientific reports, 2018-10, Vol.8 (1), p.15338-16, Article 15338 [Periódico revisado por pares]

England: Nature Publishing Group

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9
Primary and Secondary Metabolic Effects of a Key Gene Deletion (Δ YPL062W ) in Metabolically Engineered Terpenoid-Producing Saccharomyces cerevisiae
Primary and Secondary Metabolic Effects of a Key Gene Deletion (Δ YPL062W ) in Metabolically Engineered Terpenoid-Producing Saccharomyces cerevisiae
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Primary and Secondary Metabolic Effects of a Key Gene Deletion (Δ YPL062W ) in Metabolically Engineered Terpenoid-Producing Saccharomyces cerevisiae

Chen, Yan ; Wang, Ying ; Liu, Ming ; Qu, Junze ; Yao, Mingdong ; Li, Bo ; Ding, Mingzhu ; Liu, Hong ; Xiao, Wenhai ; Yuan, Yingjin Cann, Isaac

Applied and environmental microbiology, 2019-04, Vol.85 (7) [Periódico revisado por pares]

United States: American Society for Microbiology

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10
Immune receptor repertoires in pediatric and adult acute myeloid leukemia
Immune receptor repertoires in pediatric and adult acute myeloid leukemia
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Immune receptor repertoires in pediatric and adult acute myeloid leukemia

Zhang, Jian ; Hu, Xihao ; Wang, Jin ; Sahu, Avinash Das ; Cohen, David ; Song, Li ; Ouyang, Zhangyi ; Fan, Jingyu ; Wang, Binbin ; Fu, Jingxin ; Gu, Shengqing ; Sade-Feldman, Moshe ; Hacohen, Nir ; Li, Wuju ; Ying, Xiaomin ; Li, Bo ; Liu, X Shirley

Genome medicine, 2019-11, Vol.11 (1), p.73-73, Article 73 [Periódico revisado por pares]

England: BioMed Central Ltd

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