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Many Human Large Intergenic Noncoding RNAs Associate with Chromatin-Modifying Complexes and Affect Gene Expression
Many Human Large Intergenic Noncoding RNAs Associate with Chromatin-Modifying Complexes and Affect Gene Expression
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Many Human Large Intergenic Noncoding RNAs Associate with Chromatin-Modifying Complexes and Affect Gene Expression

Khalil, Ahmad M. ; Guttman, Mitchell ; Huarte, Maite ; Garber, Manuel ; Raj, Arjun ; Morales, Dianali Rivea ; Thomas, Kelly ; Presser, Aviva ; Bernstein, Bradley E. ; van Oudenaarden, Alexander ; Regev, Aviv ; Lander, Eric S. ; Rinn, John L.

Proceedings of the National Academy of Sciences - PNAS, 2009-07, Vol.106 (28), p.11667-11672 [Periódico revisado por pares]

United States: National Academy of Sciences

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2
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells
Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells
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Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells

Mimitou, Eleni P ; Lareau, Caleb A ; Chen, Kelvin Y ; Zorzetto-Fernandes, Andre L ; Hao, Yuhan ; Takeshima, Yusuke ; Luo, Wendy ; Huang, Tse-Shun ; Yeung, Bertrand Z ; Papalexi, Efthymia ; Thakore, Pratiksha I ; Kibayashi, Tatsuya ; Wing, James Badger ; Hata, Mayu ; Satija, Rahul ; Nazor, Kristopher L ; Sakaguchi, Shimon ; Ludwig, Leif S ; Sankaran, Vijay G ; Regev, Aviv ; Smibert, Peter

Nature biotechnology, 2021-10, Vol.39 (10), p.1246-1258 [Periódico revisado por pares]

United States: Nature Publishing Group

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3
Optimal-Transport Analysis of Single-Cell Gene Expression Identifies Developmental Trajectories in Reprogramming
Optimal-Transport Analysis of Single-Cell Gene Expression Identifies Developmental Trajectories in Reprogramming
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Optimal-Transport Analysis of Single-Cell Gene Expression Identifies Developmental Trajectories in Reprogramming

Schiebinger, Geoffrey ; Shu, Jian ; Tabaka, Marcin ; Cleary, Brian ; Subramanian, Vidya ; Solomon, Aryeh ; Gould, Joshua ; Liu, Siyan ; Lin, Stacie ; Berube, Peter ; Lee, Lia ; Chen, Jenny ; Brumbaugh, Justin ; Rigollet, Philippe ; Hochedlinger, Konrad ; Jaenisch, Rudolf ; Regev, Aviv ; Lander, Eric S.

Cell, 2019-02, Vol.176 (4), p.928-943.e22 [Periódico revisado por pares]

United States: Elsevier Inc

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4
Electrical and synaptic integration of glioma into neural circuits
Electrical and synaptic integration of glioma into neural circuits
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Electrical and synaptic integration of glioma into neural circuits

Venkatesh, Humsa S ; Morishita, Wade ; Geraghty, Anna C ; Silverbush, Dana ; Gillespie, Shawn M ; Arzt, Marlene ; Tam, Lydia T ; Espenel, Cedric ; Ponnuswami, Anitha ; Ni, Lijun ; Woo, Pamelyn J ; Taylor, Kathryn R ; Agarwal, Amit ; Regev, Aviv ; Brang, David ; Vogel, Hannes ; Hervey-Jumper, Shawn ; Bergles, Dwight E ; Suvà, Mario L ; Malenka, Robert C ; Monje, Michelle

Nature (London), 2019-09, Vol.573 (7775), p.539-545 [Periódico revisado por pares]

England: Nature Publishing Group

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5
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation
Single-cell RNA-seq reveals dynamic paracrine control of cellular variation
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Single-cell RNA-seq reveals dynamic paracrine control of cellular variation

Shalek, Alex K ; Satija, Rahul ; Shuga, Joe ; Trombetta, John J ; Gennert, Dave ; Lu, Diana ; Chen, Peilin ; Gertner, Rona S ; Gaublomme, Jellert T ; Yosef, Nir ; Schwartz, Schraga ; Fowler, Brian ; Weaver, Suzanne ; Wang, Jing ; Wang, Xiaohui ; Ding, Ruihua ; Raychowdhury, Raktima ; Friedman, Nir ; Hacohen, Nir ; Park, Hongkun ; May, Andrew P ; Regev, Aviv

Nature (London), 2014-06, Vol.510 (7505), p.363-369 [Periódico revisado por pares]

England: Nature Publishing Group

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6
Densely Interconnected Transcriptional Circuits Control Cell States in Human Hematopoiesis
Densely Interconnected Transcriptional Circuits Control Cell States in Human Hematopoiesis
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Densely Interconnected Transcriptional Circuits Control Cell States in Human Hematopoiesis

Novershtern, Noa ; Subramanian, Aravind ; Lawton, Lee N. ; Mak, Raymond H. ; Haining, W. Nicholas ; McConkey, Marie E. ; Habib, Naomi ; Yosef, Nir ; Chang, Cindy Y. ; Shay, Tal ; Frampton, Garrett M. ; Drake, Adam C.B. ; Leskov, Ilya ; Nilsson, Bjorn ; Preffer, Fred ; Dombkowski, David ; Evans, John W. ; Liefeld, Ted ; Smutko, John S. ; Chen, Jianzhu ; Friedman, Nir ; Young, Richard A. ; Golub, Todd R. ; Regev, Aviv ; Ebert, Benjamin L.

Cell, 2011-01, Vol.144 (2), p.296-309 [Periódico revisado por pares]

United States: Elsevier Inc

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7
Scaling single-cell genomics from phenomenology to mechanism
Scaling single-cell genomics from phenomenology to mechanism
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Scaling single-cell genomics from phenomenology to mechanism

Tanay, Amos ; Regev, Aviv

Nature (London), 2017-01, Vol.541 (7637), p.331-338 [Periódico revisado por pares]

England: Nature Publishing Group

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8
An embryonic stem cell-like gene expression signature in poorly differentiated aggressive human tumors
An embryonic stem cell-like gene expression signature in poorly differentiated aggressive human tumors
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An embryonic stem cell-like gene expression signature in poorly differentiated aggressive human tumors

Weinberg, Robert A ; Ben-Porath, Ittai ; Thomson, Matthew W ; Carey, Vincent J ; Ge, Ruping ; Bell, George W ; Regev, Aviv

Nature genetics, 2008-05, Vol.40 (5), p.499-507 [Periódico revisado por pares]

London: Nature Publishing Group

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9
High-resolution interrogation of functional elements in the noncoding genome
High-resolution interrogation of functional elements in the noncoding genome
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High-resolution interrogation of functional elements in the noncoding genome

Sanjana, Neville E. ; Wright, Jason ; Zheng, Kaijie ; Shalem, Ophir ; Fontanillas, Pierre ; Joung, Julia ; Cheng, Christine ; Regev, Aviv ; Zhang, Feng

Science (American Association for the Advancement of Science), 2016-09, Vol.353 (6307), p.1545-1549 [Periódico revisado por pares]

United States: American Association for the Advancement of Science

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10
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis
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Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis

Pauli, Andrea ; Valen, Eivind ; Lin, Michael F ; Garber, Manuel ; Vastenhouw, Nadine L ; Levin, Joshua Z ; Fan, Lin ; Sandelin, Albin ; Rinn, John L ; Regev, Aviv ; Schier, Alexander F

Genome research, 2012-03, Vol.22 (3), p.577-591 [Periódico revisado por pares]

United States: Cold Spring Harbor Laboratory Press

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