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1
Improving the trans-ancestry portability of polygenic risk scores by prioritizing variants in predicted cell-type-specific regulatory elements
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Improving the trans-ancestry portability of polygenic risk scores by prioritizing variants in predicted cell-type-specific regulatory elements

Amariuta, Tiffany ; Ishigaki, Kazuyoshi ; Sugishita, Hiroki ; Ohta, Tazro ; Koido, Masaru ; Dey, Kushal K ; Matsuda, Koichi ; Murakami, Yoshinori ; Price, Alkes L ; Kawakami, Eiryo ; Terao, Chikashi ; Raychaudhuri, Soumya

Nature genetics, 2020-12, Vol.52 (12), p.1346-1354 [Periódico revisado por pares]

United States: Nature Publishing Group

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2
High-throughput identification of noncoding functional SNPs via type IIS enzyme restriction
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High-throughput identification of noncoding functional SNPs via type IIS enzyme restriction

Li, Gang ; Martínez-Bonet, Marta ; Wu, Di ; Yang, Yu ; Cui, Jing ; Nguyen, Hung N ; Cunin, Pierre ; Levescot, Anaïs ; Bai, Ming ; Westra, Harm-Jan ; Okada, Yukinori ; Brenner, Michael B ; Raychaudhuri, Soumya ; Hendrickson, Eric A ; Maas, Richard L ; Nigrovic, Peter A

Nature genetics, 2018-08, Vol.50 (8), p.1180-1188 [Periódico revisado por pares]

United States: Nature Publishing Group

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3
Imputing amino acid polymorphisms in human leukocyte antigens
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Imputing amino acid polymorphisms in human leukocyte antigens

Jia, Xiaoming ; Han, Buhm ; Onengut-Gumuscu, Suna ; Chen, Wei-Min ; Concannon, Patrick J ; Rich, Stephen S ; Raychaudhuri, Soumya ; de Bakker, Paul I W Tang, Jianming

PloS one, 2013-06, Vol.8 (6), p.e64683-e64683 [Periódico revisado por pares]

United States: Public Library of Science

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4
Tissue-Specific Enrichment of Lymphoma Risk Loci in Regulatory Elements
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Tissue-Specific Enrichment of Lymphoma Risk Loci in Regulatory Elements

Hayes, James E ; Trynka, Gosia ; Vijai, Joseph ; Offit, Kenneth ; Raychaudhuri, Soumya ; Klein, Robert J Prokunina-Olsson, Ludmila

PloS one, 2015-09, Vol.10 (9), p.e0139360-e0139360 [Periódico revisado por pares]

United States: Public Library of Science

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5
Genetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization
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Genetic association study of QT interval highlights role for calcium signaling pathways in myocardial repolarization

Arking, Dan E ; Pulit, Sara L ; van der Harst, Pim ; Koopmann, Tamara T ; Sotoodehnia, Nona ; Wang, Xinchen ; Bradford, Yuki ; Tarasov, Kirill V ; Smith, Albert Vernon ; Bis, Joshua C ; Isaacs, Aaron ; Lyytikäinen, Leo-Pekka ; Ellinghaus, David ; Navarro, Pau ; Tester, David J ; Morris, Richard W ; Naluai, Åsa T ; Padmanabhan, Sandosh ; Kluttig, Alexander ; Torres, Maria ; Hubacek, Jaroslav A ; Raychaudhuri, Soumya ; Launer, Lenore J ; Shuldiner, Alan R ; Bader, Joel S ; Ehret, Georg ; Kao, W H Linda ; Brown, Morris ; Caulfield, Mark J ; Kronenberg, Florian ; Willeit, Johann ; Smith, J Gustav ; Werdan, Karl ; Zelante, Leopoldo ; Heckbert, Susan R ; Rotter, Jerome I ; Kolcic, Ivana ; Daly, Mark J ; Denny, Joshua C ; Roden, Dan M ; Zuvich, Rebecca L ; Yin, Xiaoyan ; Bobbo, Marco ; Sinagra, Gianfranco ; Carracedo, Angel ; Kontula, Kimmo K ; Oikarinen, Lasse ; Jöckel, Karl-Heinz ; Loos, Ruth J F ; Thelle, Dag S ; Gieger, Christian ; Perz, Siegfried ; Waldenberger, Melanie ; de Boer, Rudolf A ; Beckmann, Britt Maria ; Martens, Eimo ; Bardai, Abdennasser ; Wilde, Arthur A M ; Behr, Elijah R ; Barc, Julien ; Kyndt, Florence ; Probst, Vincent ; Margulies, Kenneth ; O'Connell, Jeffrey R ; Frey, Norbert ; Asselbergs, Folkert W ; Navis, Gerjan ; van Veldhuisen, Dirk J ; Kellis, Manolis ; Franco, Oscar H ; Kors, Jan A ; Uitterlinden, André G ; Witteman, Jacqueline C M ; Lamina, Claudia ; Abecasis, Gonçalo R ; Lakatta, Edward G ; Orrú, Marco ; Schlessinger, David ; Markus, Marcello R P ; Snieder, Harold ; Spector, Timothy D ; Lind, Lars ; Kähönen, Mika ; Raitakari, Olli T ; Brion, Maria ; Nicolaides, Andrew N ; Whincup, Peter H ; Rudan, Igor ; Franke, Andre ; Mühleisen, Thomas W ; Pramstaller, Peter P ; Lehtimäki, Terho J ; Liu, Yongmei ; van Duijn, Cornelia M ; Jamshidi, Yalda ; Sanna, Serena ; Boyer, Laurie A ; Olsen, Jesper V ; Lage, Kasper ; Kääb, Stefan

Nature genetics, 2014-08, Vol.46 (8), p.826-836 [Periódico revisado por pares]

United States: Nature Publishing Group

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6
Accurate imputation of human leukocyte antigens with CookHLA
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Accurate imputation of human leukocyte antigens with CookHLA

Cook, Seungho ; Choi, Wanson ; Lim, Hyunjoon ; Luo, Yang ; Kim, Kunhee ; Jia, Xiaoming ; Raychaudhuri, Soumya ; Han, Buhm

Nature communications, 2021-02, Vol.12 (1), p.1264-1264, Article 1264 [Periódico revisado por pares]

England: Nature Publishing Group

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7
Chromatin marks identify critical cell types for fine mapping complex trait variants
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Chromatin marks identify critical cell types for fine mapping complex trait variants

Trynka, Gosia ; Sandor, Cynthia ; Han, Buhm ; Xu, Han ; Stranger, Barbara E ; Liu, X Shirley ; Raychaudhuri, Soumya

Nature genetics, 2013-02, Vol.45 (2), p.124-130 [Periódico revisado por pares]

United States: Nature Publishing Group

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8
Genetic risk of extranodal natural killer T-cell lymphoma: a genome-wide association study
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Genetic risk of extranodal natural killer T-cell lymphoma: a genome-wide association study

Li, Zheng, PhD ; Xia, Yi, MD ; Feng, Li-Na, MD ; Chen, Jie-Rong, BSc ; Li, Hong-Min, MD ; Cui, Jing, PhD ; Cai, Qing-Qing, Prof ; Sim, Kar Seng, MS ; Nairismägi, Maarja-Liisa, PhD ; Laurensia, Yurike, BSc ; Meah, Wee Yang, BSc ; Liu, Wen-Sheng, MMS ; Guo, Yun-Miao, PhD ; Chen, Li-Zhen, ADN ; Feng, Qi-Sheng, BSc ; Pang, Chi Pui, DPhil ; Chen, Li Jia, PhD ; Chew, Soo Hong, Prof ; Ebstein, Richard P, Prof ; Foo, Jia Nee, PhD ; Liu, Jianjun, Prof ; Ha, Jeslin, BSc ; Khoo, Lay Poh, BSc ; Chin, Suk Teng, BSc ; Zeng, Yi-Xin, Prof ; Aung, Tin, Prof ; Chowbay, Balram, Prof ; Diong, Colin Phipps, MD ; Zhang, Fen, MD ; Liu, Yan-Hui, MD ; Tang, Tiffany, MD ; Tao, Miriam, MD ; Quek, Richard, MD ; Mohamad, Farid, MD ; Tan, Soo Yong, Prof ; Teh, Bin Tean, Prof ; Ng, Siok Bian, FRCPA ; Chng, Wee Joo, Prof ; Ong, Choon Kiat, PhD ; Okada, Yukinori, PhD ; Raychaudhuri, Soumya, PhD ; Lim, Soon Thye, MD ; Tan, Wen, Prof ; Peng, Rou-Jun, MD ; Khor, Chiea Chuen, PhD ; Bei, Jin-Xin, Prof

The lancet oncology, 2016-09, Vol.17 (9), p.1240-1247 [Periódico revisado por pares]

England: Elsevier Ltd

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9
Five amino acids in three HLA proteins explain most of the association between MHC and seropositive rheumatoid arthritis
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Five amino acids in three HLA proteins explain most of the association between MHC and seropositive rheumatoid arthritis

RAYCHAUDHURI, Soumya ; SANDOR, Cynthia ; SIMINOVITCH, Katherine A ; BAE, Sang-Cheol ; PLENGE, Robert M ; GREGERSEN, Peter K ; DE BAKKER, Paul I. W ; STAHL, Eli A ; FREUDENBERG, Jan ; LEE, Hye-Soon ; XIAOMING JIA ; ALFREDSSON, Lars ; PADYUKOV, Leonid ; KLARESKOG, Lars ; WORTHINGTON, Jane

Nature genetics, 2012-03, Vol.44 (3), p.291-296 [Periódico revisado por pares]

New York, NY: Nature Publishing Group

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10
The genetic basis of autoimmunity seen through the lens of T cell functional traits
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The genetic basis of autoimmunity seen through the lens of T cell functional traits

Lagattuta, Kaitlyn A ; Park, Hannah L ; Rumker, Laurie ; Ishigaki, Kazuyoshi ; Nathan, Aparna ; Raychaudhuri, Soumya

Nature communications, 2024-02, Vol.15 (1), p.1204-1204 [Periódico revisado por pares]

England: Nature Publishing Group

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