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Mass spectrometry reveals the chemistry of formaldehyde cross-linking in structured proteins
Mass spectrometry reveals the chemistry of formaldehyde cross-linking in structured proteins
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Mass spectrometry reveals the chemistry of formaldehyde cross-linking in structured proteins

Tayri-Wilk, Tamar ; Slavin, Moriya ; Zamel, Joanna ; Blass, Ayelet ; Cohen, Shon ; Motzik, Alex ; Sun, Xue ; Shalev, Deborah E ; Ram, Oren ; Kalisman, Nir

Nature communications, 2020-06, Vol.11 (1), p.3128-3128, Article 3128 [Periódico revisado por pares]

England: Nature Publishing Group

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Single-molecule decoding of combinatorially modified nucleosomes
Single-molecule decoding of combinatorially modified nucleosomes
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Single-molecule decoding of combinatorially modified nucleosomes

Shema, Efrat ; Jones, Daniel ; Shoresh, Noam ; Donohue, Laura ; Ram, Oren ; Bernstein, Bradley E.

Science (American Association for the Advancement of Science), 2016-05, Vol.352 (6286), p.717-721 [Periódico revisado por pares]

United States: American Association for the Advancement of Science

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3
Detection and removal of biases in the analysis of next-generation sequencing reads
Detection and removal of biases in the analysis of next-generation sequencing reads
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Detection and removal of biases in the analysis of next-generation sequencing reads

Schwartz, Schraga ; Oren, Ram ; Ast, Gil Lopez-Garcia, Purification

PloS one, 2011-01, Vol.6 (1), p.e16685-e16685 [Periódico revisado por pares]

United States: Public Library of Science

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4
DNA methylation patterns expose variations in enhancer-chromatin modifications during embryonic stem cell differentiation
DNA methylation patterns expose variations in enhancer-chromatin modifications during embryonic stem cell differentiation
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DNA methylation patterns expose variations in enhancer-chromatin modifications during embryonic stem cell differentiation

Alajem, Adi ; Roth, Hava ; Ratgauzer, Sofia ; Bavli, Danny ; Motzik, Alex ; Lahav, Shlomtzion ; Peled, Itay ; Ram, Oren Greally, John M.

PLoS genetics, 2021-04, Vol.17 (4), p.e1009498-e1009498 [Periódico revisado por pares]

United States: Public Library of Science

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5
Locus-specific editing of histone modifications at endogenous enhancers
Locus-specific editing of histone modifications at endogenous enhancers
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Locus-specific editing of histone modifications at endogenous enhancers

Mendenhall, Eric M ; Williamson, Kaylyn E ; Reyon, Deepak ; Zou, James Y ; Ram, Oren ; Joung, J Keith ; Bernstein, Bradley E

Nature biotechnology, 2013-12, Vol.31 (12), p.1133-1136 [Periódico revisado por pares]

United States: Nature Publishing Group

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6
Bisection of the X chromosome disrupts the initiation of chromosome silencing during meiosis in Caenorhabditis elegans
Bisection of the X chromosome disrupts the initiation of chromosome silencing during meiosis in Caenorhabditis elegans
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Bisection of the X chromosome disrupts the initiation of chromosome silencing during meiosis in Caenorhabditis elegans

Rappaport, Yisrael ; Achache, Hanna ; Falk, Roni ; Murik, Omer ; Ram, Oren ; Tzur, Yonatan B

Nature communications, 2021-08, Vol.12 (1), p.4802-4802, Article 4802 [Periódico revisado por pares]

England: Nature Publishing Group

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7
Delineating the heterogeneity of matrix-directed differentiation toward soft and stiff tissue lineages via single-cell profiling
Delineating the heterogeneity of matrix-directed differentiation toward soft and stiff tissue lineages via single-cell profiling
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Delineating the heterogeneity of matrix-directed differentiation toward soft and stiff tissue lineages via single-cell profiling

Brielle, Shlomi ; Bavli, Danny ; Motzik, Alex ; Kan-Tor, Yoav ; Sun, Xue ; Kozulin, Chen ; Avni, Batia ; Ram, Oren ; Buxboim, Amnon

Proceedings of the National Academy of Sciences - PNAS, 2021-05, Vol.118 (19), p.1 [Periódico revisado por pares]

United States: National Academy of Sciences

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8
High-Throughput Single-Cell Labeling (Hi-SCL) for RNA-Seq Using Drop-Based Microfluidics
High-Throughput Single-Cell Labeling (Hi-SCL) for RNA-Seq Using Drop-Based Microfluidics
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High-Throughput Single-Cell Labeling (Hi-SCL) for RNA-Seq Using Drop-Based Microfluidics

Rotem, Assaf ; Ram, Oren ; Shoresh, Noam ; Sperling, Ralph A ; Schnall-Levin, Michael ; Zhang, Huidan ; Basu, Anindita ; Bernstein, Bradley E ; Weitz, David A Kaderali, Lars

PloS one, 2015-05, Vol.10 (5), p.e0116328-e0116328 [Periódico revisado por pares]

United States: Public Library of Science

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9
Direct Induction of the Three Pre-implantation Blastocyst Cell Types from Fibroblasts
Direct Induction of the Three Pre-implantation Blastocyst Cell Types from Fibroblasts
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Direct Induction of the Three Pre-implantation Blastocyst Cell Types from Fibroblasts

Benchetrit, Hana ; Jaber, Mohammad ; Zayat, Valery ; Sebban, Shulamit ; Pushett, Avital ; Makedonski, Kirill ; Zakheim, Zvi ; Radwan, Ahmed ; Maoz, Noam ; Lasry, Rachel ; Renous, Noa ; Inbar, Michal ; Ram, Oren ; Kaplan, Tommy ; Buganim, Yosef

Cell stem cell, 2019-06, Vol.24 (6), p.983-994.e7 [Periódico revisado por pares]

United States: Elsevier Inc

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10
Combinatorial Patterning of Chromatin Regulators Uncovered by Genome-wide Location Analysis in Human Cells
Combinatorial Patterning of Chromatin Regulators Uncovered by Genome-wide Location Analysis in Human Cells
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Combinatorial Patterning of Chromatin Regulators Uncovered by Genome-wide Location Analysis in Human Cells

Ram, Oren ; Goren, Alon ; Amit, Ido ; Shoresh, Noam ; Yosef, Nir ; Ernst, Jason ; Kellis, Manolis ; Gymrek, Melissa ; Issner, Robbyn ; Coyne, Michael ; Durham, Timothy ; Zhang, Xiaolan ; Donaghey, Julie ; Epstein, Charles B. ; Regev, Aviv ; Bernstein, Bradley E.

Cell, 2011-12, Vol.147 (7), p.1628-1639 [Periódico revisado por pares]

United States: Elsevier Inc

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