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1
Genome-wide Modeling of Polygenic Risk Score in Colorectal Cancer Risk
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Genome-wide Modeling of Polygenic Risk Score in Colorectal Cancer Risk

Thomas, Minta ; Sakoda, Lori C. ; Hoffmeister, Michael ; Rosenthal, Elisabeth A. ; Lee, Jeffrey K. ; van Duijnhoven, Franzel J.B. ; Platz, Elizabeth A. ; Wu, Anna H. ; Dampier, Christopher H. ; de la Chapelle, Albert ; Wolk, Alicja ; Joshi, Amit D. ; Burnett-Hartman, Andrea ; Gsur, Andrea ; Lindblom, Annika ; Castells, Antoni ; Win, Aung Ko ; Namjou, Bahram ; Van Guelpen, Bethany ; Tangen, Catherine M. ; He, Qianchuan ; Li, Christopher I. ; Schafmayer, Clemens ; Joshu, Corinne E. ; Ulrich, Cornelia M. ; Bishop, D. Timothy ; Buchanan, Daniel D. ; Schaid, Daniel ; Drew, David A. ; Muller, David C. ; Duggan, David ; Crosslin, David R. ; Albanes, Demetrius ; Giovannucci, Edward L. ; Larson, Eric ; Qu, Flora ; Mentch, Frank ; Giles, Graham G. ; Hakonarson, Hakon ; Hampel, Heather ; Stanaway, Ian B. ; Figueiredo, Jane C. ; Huyghe, Jeroen R. ; Minnier, Jessica ; Chang-Claude, Jenny ; Hampe, Jochen ; Harley, John B. ; Visvanathan, Kala ; Curtis, Keith R. ; Offit, Kenneth ; Li, Li ; Le Marchand, Loic ; Vodickova, Ludmila ; Gunter, Marc J. ; Jenkins, Mark A. ; Slattery, Martha L. ; Lemire, Mathieu ; Woods, Michael O. ; Song, Mingyang ; Murphy, Neil ; Lindor, Noralane M. ; Dikilitas, Ozan ; Pharoah, Paul D.P. ; Campbell, Peter T. ; Newcomb, Polly A. ; Milne, Roger L. ; MacInnis, Robert J. ; Castellví-Bel, Sergi ; Ogino, Shuji ; Berndt, Sonja I. ; Bézieau, Stéphane ; Thibodeau, Stephen N. ; Gallinger, Steven J. ; Zaidi, Syed H. ; Harrison, Tabitha A. ; Keku, Temitope O. ; Hudson, Thomas J. ; Vymetalkova, Veronika ; Moreno, Victor ; Martín, Vicente ; Arndt, Volker ; Wei, Wei-Qi ; Chung, Wendy ; Su, Yu-Ru ; Hayes, Richard B. ; White, Emily ; Vodicka, Pavel ; Casey, Graham ; Gruber, Stephen B. ; Schoen, Robert E. ; Chan, Andrew T. ; Potter, John D. ; Brenner, Hermann ; Jarvik, Gail P. ; Corley, Douglas A. ; Peters, Ulrike ; Hsu, Li

American journal of human genetics, 2020-09, Vol.107 (3), p.432-444 [Periódico revisado por pares]

United States: Elsevier Inc

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2
A renewed model of pancreatic cancer evolution based on genomic rearrangement patterns
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A renewed model of pancreatic cancer evolution based on genomic rearrangement patterns

Notta, Faiyaz ; Chan-Seng-Yue, Michelle ; Lemire, Mathieu ; Li, Yilong ; Wilson, Gavin W ; Connor, Ashton A ; Denroche, Robert E ; Liang, Sheng-Ben ; Brown, Andrew M K ; Kim, Jaeseung C ; Wang, Tao ; Simpson, Jared T ; Beck, Timothy ; Borgida, Ayelet ; Buchner, Nicholas ; Chadwick, Dianne ; Hafezi-Bakhtiari, Sara ; Dick, John E ; Heisler, Lawrence ; Hollingsworth, Michael A ; Ibrahimov, Emin ; Jang, Gun Ho ; Johns, Jeremy ; Jorgensen, Lars G T ; Law, Calvin ; Ludkovski, Olga ; Lungu, Ilinca ; Ng, Karen ; Pasternack, Danielle ; Petersen, Gloria M ; Shlush, Liran I ; Timms, Lee ; Tsao, Ming-Sound ; Wilson, Julie M ; Yung, Christina K ; Zogopoulos, George ; Bartlett, John M S ; Alexandrov, Ludmil B ; Real, Francisco X ; Cleary, Sean P ; Roehrl, Michael H ; McPherson, John D ; Stein, Lincoln D ; Hudson, Thomas J ; Campbell, Peter J ; Gallinger, Steven

Nature (London), 2016-10, Vol.538 (7625), p.378-382 [Periódico revisado por pares]

England: Nature Publishing Group

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3
Association of Aspirin and NSAID Use With Risk of Colorectal Cancer According to Genetic Variants
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Association of Aspirin and NSAID Use With Risk of Colorectal Cancer According to Genetic Variants

Nan, Hongmei ; Hutter, Carolyn M ; Lin, Yi ; Jacobs, Eric J ; Ulrich, Cornelia M ; White, Emily ; Baron, John A ; Berndt, Sonja I ; Brenner, Hermann ; Butterbach, Katja ; Caan, Bette J ; Campbell, Peter T ; Carlson, Christopher S ; Casey, Graham ; Chang-Claude, Jenny ; Chanock, Stephen J ; Cotterchio, Michelle ; Duggan, David ; Figueiredo, Jane C ; Fuchs, Charles S ; Giovannucci, Edward L ; Gong, Jian ; Haile, Robert W ; Harrison, Tabitha A ; Hayes, Richard B ; Hoffmeister, Michael ; Hopper, John L ; Hudson, Thomas J ; Jenkins, Mark A ; Jiao, Shuo ; Lindor, Noralane M ; Lemire, Mathieu ; Le Marchand, Loic ; Newcomb, Polly A ; Ogino, Shuji ; Pflugeisen, Bethann M ; Potter, John D ; Qu, Conghui ; Rosse, Stephanie A ; Rudolph, Anja ; Schoen, Robert E ; Schumacher, Fredrick R ; Seminara, Daniela ; Slattery, Martha L ; Thibodeau, Stephen N ; Thomas, Fridtjof ; Thornquist, Mark ; Warnick, Greg S ; Zanke, Brent W ; Gauderman, W. James ; Peters, Ulrike ; Hsu, Li ; Chan, Andrew T

JAMA : the journal of the American Medical Association, 2015-03, Vol.313 (11), p.1133-1142 [Periódico revisado por pares]

United States: American Medical Association

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4
Meta-analysis of new genome-wide association studies of colorectal cancer risk
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Meta-analysis of new genome-wide association studies of colorectal cancer risk

Peters, Ulrike ; Hutter, Carolyn M. ; Hsu, Li ; Schumacher, Fredrick R. ; Conti, David V. ; Carlson, Christopher S. ; Edlund, Christopher K. ; Haile, Robert W. ; Gallinger, Steven ; Zanke, Brent W. ; Lemire, Mathieu ; Rangrej, Jagadish ; Vijayaraghavan, Raakhee ; Chan, Andrew T. ; Hazra, Aditi ; Hunter, David J. ; Ma, Jing ; Fuchs, Charles S. ; Giovannucci, Edward L. ; Kraft, Peter ; Liu, Yan ; Chen, Lin ; Jiao, Shuo ; Makar, Karen W. ; Taverna, Darin ; Gruber, Stephen B. ; Rennert, Gad ; Moreno, Victor ; Ulrich, Cornelia M. ; Woods, Michael O. ; Green, Roger C. ; Parfrey, Patrick S. ; Prentice, Ross L. ; Kooperberg, Charles ; Jackson, Rebecca D. ; LaCroix, Andrea Z. ; Caan, Bette J. ; Hayes, Richard B. ; Berndt, Sonja I. ; Chanock, Stephen J. ; Schoen, Robert E. ; Chang-Claude, Jenny ; Hoffmeister, Michael ; Brenner, Hermann ; Frank, Bernd ; Bézieau, Stéphane ; Küry, Sébastien ; Slattery, Martha L. ; Hopper, John L. ; Jenkins, Mark A. ; Le Marchand, Loic ; Lindor, Noralane M. ; Newcomb, Polly A. ; Seminara, Daniela ; Hudson, Thomas J. ; Duggan, David J. ; Potter, John D. ; Casey, Graham

Human genetics, 2012-02, Vol.131 (2), p.217-234 [Periódico revisado por pares]

Berlin/Heidelberg: Springer-Verlag

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5
Whole genomes define concordance of matched primary, xenograft, and organoid models of pancreas cancer
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Whole genomes define concordance of matched primary, xenograft, and organoid models of pancreas cancer

Gendoo, Deena M A ; Denroche, Robert E ; Zhang, Amy ; Radulovich, Nikolina ; Jang, Gun Ho ; Lemire, Mathieu ; Fischer, Sandra ; Chadwick, Dianne ; Lungu, Ilinca M ; Ibrahimov, Emin ; Cao, Ping-Jiang ; Stein, Lincoln D ; Wilson, Julie M ; Bartlett, John M S ; Tsao, Ming-Sound ; Dhani, Neesha ; Hedley, David ; Gallinger, Steven ; Haibe-Kains, Benjamin Tanay, Amos

PLoS computational biology, 2019-01, Vol.15 (1), p.e1006596-e1006596 [Periódico revisado por pares]

United States: Public Library of Science

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6
Functional normalization of 450k methylation array data improves replication in large cancer studies
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Functional normalization of 450k methylation array data improves replication in large cancer studies

Fortin, Jean-Philippe ; Labbe, Aurélie ; Lemire, Mathieu ; Zanke, Brent W ; Hudson, Thomas J ; Fertig, Elana J ; Greenwood, Celia Mt ; Hansen, Kasper D

Genome Biology (Online Edition), 2014-12, Vol.15 (12), p.503-503, Article 503 [Periódico revisado por pares]

England: BioMed Central Ltd

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7
Landscape of somatic single nucleotide variants and indels in colorectal cancer and impact on survival
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Landscape of somatic single nucleotide variants and indels in colorectal cancer and impact on survival

Zaidi, Syed H ; Harrison, Tabitha A ; Phipps, Amanda I ; Steinfelder, Robert ; Trinh, Quang M ; Qu, Conghui ; Banbury, Barbara L ; Georgeson, Peter ; Grasso, Catherine S ; Giannakis, Marios ; Adams, Jeremy B ; Alwers, Elizabeth ; Amitay, Efrat L ; Barfield, Richard T ; Berndt, Sonja I ; Borozan, Ivan ; Brenner, Hermann ; Brezina, Stefanie ; Buchanan, Daniel D ; Cao, Yin ; Chan, Andrew T ; Chang-Claude, Jenny ; Connolly, Charles M ; Drew, David A ; Farris, 3rd, Alton Brad ; Figueiredo, Jane C ; French, Amy J ; Fuchs, Charles S ; Garraway, Levi A ; Gruber, Steve ; Guinter, Mark A ; Hamilton, Stanley R ; Harlid, Sophia ; Heisler, Lawrence E ; Hidaka, Akihisa ; Hopper, John L ; Huang, Wen-Yi ; Huyghe, Jeroen R ; Jenkins, Mark A ; Krzyzanowski, Paul M ; Lemire, Mathieu ; Lin, Yi ; Luo, Xuemei ; Mardis, Elaine R ; McPherson, John D ; Miller, Jessica K ; Moreno, Victor ; Mu, Xinmeng Jasmine ; Nishihara, Reiko ; Papadopoulos, Nickolas ; Pasternack, Danielle ; Quist, Michael J ; Rafikova, Adilya ; Reid, Emma E G ; Shinbrot, Eve ; Shirts, Brian H ; Stein, Lincoln D ; Teney, Cherie D ; Timms, Lee ; Um, Caroline Y ; Van Guelpen, Bethany ; Van Tassel, Megan ; Wang, Xiaolong ; Wheeler, David A ; Yung, Christina K ; Hsu, Li ; Ogino, Shuji ; Gsur, Andrea ; Newcomb, Polly A ; Gallinger, Steven ; Hoffmeister, Michael ; Campbell, Peter T ; Thibodeau, Stephen N ; Sun, Wei ; Hudson, Thomas J ; Peters, Ulrike

Nature communications, 2020-07, Vol.11 (1), p.3644-12, Article 3644 [Periódico revisado por pares]

England: Nature Publishing Group

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8
Genome-wide association study of colorectal cancer identifies six new susceptibility loci
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Genome-wide association study of colorectal cancer identifies six new susceptibility loci

Schumacher, Fredrick R ; Schmit, Stephanie L ; Jiao, Shuo ; Edlund, Christopher K ; Wang, Hansong ; Zhang, Ben ; Hsu, Li ; Huang, Shu-Chen ; Fischer, Christopher P ; Harju, John F ; Idos, Gregory E ; Lejbkowicz, Flavio ; Manion, Frank J ; McDonnell, Kevin ; McNeil, Caroline E ; Melas, Marilena ; Rennert, Hedy S ; Shi, Wei ; Thomas, Duncan C ; Van Den Berg, David J ; Hutter, Carolyn M ; Aragaki, Aaron K ; Butterbach, Katja ; Caan, Bette J ; Carlson, Christopher S ; Chanock, Stephen J ; Curtis, Keith R ; Fuchs, Charles S ; Gala, Manish ; Giovannucci, Edward L ; Gogarten, Stephanie M ; Hayes, Richard B ; Henderson, Brian ; Hunter, David J ; Jackson, Rebecca D ; Kolonel, Laurence N ; Kooperberg, Charles ; Küry, Sébastien ; LaCroix, Andrea ; Laurie, Cathy C ; Laurie, Cecelia A ; Lemire, Mathieu ; Levine, David ; Ma, Jing ; Makar, Karen W ; Qu, Conghui ; Taverna, Darin ; Ulrich, Cornelia M ; Wu, Kana ; Kono, Suminori ; West, Dee W ; Berndt, Sonja I ; Bezieau, Stéphane ; Brenner, Hermann ; Campbell, Peter T ; Chan, Andrew T ; Chang-Claude, Jenny ; Coetzee, Gerhard A ; Conti, David V ; Duggan, David ; Figueiredo, Jane C ; Fortini, Barbara K ; Gallinger, Steven J ; Gauderman, W James ; Giles, Graham ; Green, Roger ; Haile, Robert ; Harrison, Tabitha A ; Hoffmeister, Michael ; Hopper, John L ; Hudson, Thomas J ; Jacobs, Eric ; Iwasaki, Motoki ; Jee, Sun Ha ; Jenkins, Mark ; Jia, Wei-Hua ; Joshi, Amit ; Li, Li ; Lindor, Noralene M ; Matsuo, Keitaro ; Moreno, Victor ; Mukherjee, Bhramar ; Newcomb, Polly A ; Potter, John D ; Raskin, Leon ; Rennert, Gad ; Rosse, Stephanie ; Severi, Gianluca ; Schoen, Robert E ; Seminara, Daniela ; Shu, Xiao-Ou ; Slattery, Martha L ; Tsugane, Shoichiro ; White, Emily ; Xiang, Yong-Bing ; Zanke, Brent W ; Zheng, Wei ; Le Marchand, Loic ; Casey, Graham ; Gruber, Stephen B

Nature communications, 2015-07, Vol.6 (1), p.7138-7138, Article 7138 [Periódico revisado por pares]

England: Nature Publishing Group

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9
A genome-wide association study for colorectal cancer identifies a risk locus in 14q23.1
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A genome-wide association study for colorectal cancer identifies a risk locus in 14q23.1

Lemire, Mathieu ; Qu, Conghui ; Loo, Lenora W. M. ; Zaidi, Syed H. E. ; Wang, Hansong ; Berndt, Sonja I. ; Bézieau, Stéphane ; Brenner, Hermann ; Campbell, Peter T. ; Chan, Andrew T. ; Chang-Claude, Jenny ; Du, Mengmeng ; Edlund, Christopher K. ; Gallinger, Steven ; Haile, Robert W. ; Harrison, Tabitha A. ; Hoffmeister, Michael ; Hopper, John L. ; Hou, Lifang ; Hsu, Li ; Jacobs, Eric J. ; Jenkins, Mark A. ; Jeon, Jihyoun ; Küry, Sébastien ; Li, Li ; Lindor, Noralane M. ; Newcomb, Polly A. ; Potter, John D. ; Rennert, Gad ; Rudolph, Anja ; Schoen, Robert E. ; Schumacher, Fredrick R. ; Seminara, Daniela ; Severi, Gianluca ; Slattery, Martha L. ; White, Emily ; Woods, Michael O. ; Cotterchio, Michelle ; Le Marchand, Loïc ; Casey, Graham ; Gruber, Stephen B. ; Peters, Ulrike ; Hudson, Thomas J.

Human genetics, 2015-11, Vol.134 (11-12), p.1249-1262 [Periódico revisado por pares]

Berlin/Heidelberg: Springer Berlin Heidelberg

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10
Long-range epigenetic regulation is conferred by genetic variation located at thousands of independent loci
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Long-range epigenetic regulation is conferred by genetic variation located at thousands of independent loci

Lemire, Mathieu ; Zaidi, Syed H E ; Ban, Maria ; Ge, Bing ; Aïssi, Dylan ; Germain, Marine ; Kassam, Irfahan ; Wang, Mike ; Zanke, Brent W ; Gagnon, France ; Morange, Pierre-Emmanuel ; Trégouët, David-Alexandre ; Wells, Philip S ; Sawcer, Stephen ; Gallinger, Steven ; Pastinen, Tomi ; Hudson, Thomas J

Nature communications, 2015-02, Vol.6 (1), p.6326-6326, Article 6326 [Periódico revisado por pares]

England: Nature Publishing Group

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