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A longitudinal study to examine the influence of farming practices and environmental factors on pathogen prevalence using structural equation modeling
A longitudinal study to examine the influence of farming practices and environmental factors on pathogen prevalence using structural equation modeling
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A longitudinal study to examine the influence of farming practices and environmental factors on pathogen prevalence using structural equation modeling

Ferguson, Martine ; Hsu, Chiun-Kang ; Grim, Christopher ; Kauffman, Michael ; Jarvis, Karen ; Pettengill, James B ; Babu, Uma S ; Harrison, Lisa M ; Li, Baoguang ; Hayford, Alice ; Balan, Kannan V ; Freeman, Josefina P ; Rajashekara, Gireesh ; Lipp, Erin K ; Rozier, Ralph Scott ; Zimeri, Anne Marie ; Burall, Laurel S

Frontiers in microbiology, 2023-04, Vol.14, p.1141043-1141043 [Periódico revisado por pares]

Switzerland: Frontiers Media S.A

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2
An evaluation of alternative methods for constructing phylogenies from whole genome sequence data: a case study with Salmonella
An evaluation of alternative methods for constructing phylogenies from whole genome sequence data: a case study with Salmonella
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An evaluation of alternative methods for constructing phylogenies from whole genome sequence data: a case study with Salmonella

Pettengill, James B ; Luo, Yan ; Davis, Steven ; Chen, Yi ; Gonzalez-Escalona, Narjol ; Ottesen, Andrea ; Rand, Hugh ; Allard, Marc W ; Strain, Errol

PeerJ (San Francisco, CA), 2014-10, Vol.2, p.e620-e620 [Periódico revisado por pares]

United States: PeerJ. Ltd

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3
Assessment of plasmids for relating the 2020 Salmonella enterica serovar Newport onion outbreak to farms implicated by the outbreak investigation
Assessment of plasmids for relating the 2020 Salmonella enterica serovar Newport onion outbreak to farms implicated by the outbreak investigation
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Assessment of plasmids for relating the 2020 Salmonella enterica serovar Newport onion outbreak to farms implicated by the outbreak investigation

Commichaux, Seth ; Rand, Hugh ; Javkar, Kiran ; Molloy, Erin K ; Pettengill, James B ; Pightling, Arthur ; Hoffmann, Maria ; Pop, Mihai ; Jayeola, Victor ; Foley, Steven ; Luo, Yan

BMC genomics, 2023-04, Vol.24 (1), p.165-165, Article 165 [Periódico revisado por pares]

England: BioMed Central Ltd

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4
CFSAN SNP Pipeline: an automated method for constructing SNP matrices from next-generation sequence data
CFSAN SNP Pipeline: an automated method for constructing SNP matrices from next-generation sequence data
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CFSAN SNP Pipeline: an automated method for constructing SNP matrices from next-generation sequence data

Davis, Steve ; Pettengill, James B ; Luo, Yan ; Payne, Justin ; Shpuntoff, Al ; Rand, Hugh ; Strain, Errol

PeerJ. Computer science, 2015-08, Vol.1, p.e20 [Periódico revisado por pares]

San Diego: PeerJ. Ltd

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5
Characterization and Evolution of Salmonella CRISPR-Cas Systems
Characterization and Evolution of Salmonella CRISPR-Cas Systems
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Characterization and Evolution of Salmonella CRISPR-Cas Systems

Shariat, Nikki ; Timme, Ruth E ; Pettengill, James B ; Barrangou, Rodolphe ; Dudley, Edward G

2014

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6
City sanitation and socioeconomics predict rat zoonotic infection across diverse neighbourhoods
City sanitation and socioeconomics predict rat zoonotic infection across diverse neighbourhoods
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City sanitation and socioeconomics predict rat zoonotic infection across diverse neighbourhoods

Murray, Maureen H. ; Fidino, Mason ; Fyffe, Rebecca ; Byers, Kaylee A. ; Pettengill, James B. ; Sondgeroth, Kerry S. ; Killion, Halcyon ; Magle, Seth B. ; Rios, Maria Jazmin ; Ortinau, Nora ; Santymire, Rachel M.

Zoonoses and public health, 2020-09, Vol.67 (6), p.673-683 [Periódico revisado por pares]

Germany: Blackwell Publishing Ltd

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7
Co-enriching microflora associated with culture based methods to detect Salmonella from tomato phyllosphere
Co-enriching microflora associated with culture based methods to detect Salmonella from tomato phyllosphere
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Co-enriching microflora associated with culture based methods to detect Salmonella from tomato phyllosphere

Ottesen, Andrea R ; Gonzalez, Antonio ; Bell, Rebecca ; Arce, Caroline ; Rideout, Steven ; Allard, Marc ; Evans, Peter ; Strain, Errol ; Musser, Steven ; Knight, Rob ; Brown, Eric ; Pettengill, James B Chang, Yung-Fu

PloS one, 2013-09, Vol.8 (9), p.e73079 [Periódico revisado por pares]

United States: Public Library of Science

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8
Co-enriching microflora associated with culture based methods to detect Salmonella from tomato phyllosphere
Co-enriching microflora associated with culture based methods to detect Salmonella from tomato phyllosphere
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Co-enriching microflora associated with culture based methods to detect Salmonella from tomato phyllosphere

Ottesen, Andrea R ; Gonzalez, Antonio ; Bell, Rebecca ; Arce, Caroline ; Rideout, Steven ; Allard, Marc ; Evans, Peter ; Strain, Errol ; Musser, Steven ; Knight, Rob ; Brown, Eric ; Pettengill, James B

PloS one, 2013-01, Vol.8 (9)

eScholarship, University of California

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9
Comparative Genomic Analysis and Virulence Differences in Closely Related Salmonella enterica Serotype Heidelberg Isolates from Humans, Retail Meats, and Animals
Comparative Genomic Analysis and Virulence Differences in Closely Related Salmonella enterica Serotype Heidelberg Isolates from Humans, Retail Meats, and Animals
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Comparative Genomic Analysis and Virulence Differences in Closely Related Salmonella enterica Serotype Heidelberg Isolates from Humans, Retail Meats, and Animals

Hoffmann, Maria ; Zhao, Shaohua ; Pettengill, James ; Luo, Yan ; Monday, Steven R ; Abbott, Jason ; Ayers, Sherry L ; Cinar, Hediye N ; Muruvanda, Tim ; Li, Cong ; Allard, Marc W ; Whichard, Jean ; Meng, Jianghong ; Brown, Eric W ; McDermott, Patrick F

Genome biology and evolution, 2014-05, Vol.6 (5), p.1046-1068

England: Oxford University Press

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10
Draft Genome Sequences of 21 Salmonella enterica Serovar Enteritidis Strains
Draft Genome Sequences of 21 Salmonella enterica Serovar Enteritidis Strains
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Draft Genome Sequences of 21 Salmonella enterica Serovar Enteritidis Strains

Timme, Ruth E ; Allard, Marc W ; Luo, Yan ; Strain, Errol ; Pettengill, James ; Wang, Charles ; Li, Cong ; Keys, Christine E ; Zheng, Jie ; Stones, Robert ; Wilson, Mark R ; Musser, Steven M ; Brown, Eric W

Journal of Bacteriology, 2012-11, Vol.194 (21), p.5994-5995 [Periódico revisado por pares]

Washington, DC: American Society for Microbiology

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