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Refinado por: assunto: Pdb remover
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1
Assessing PDB macromolecular crystal structure confidence at the individual amino acid residue level
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Assessing PDB macromolecular crystal structure confidence at the individual amino acid residue level

Shao, Chenghua ; Bittrich, Sebastian ; Wang, Sijian ; Burley, Stephen K.

Structure (London), 2022-10, Vol.30 (10), p.1385-1394.e3 [Periódico revisado por pares]

United Kingdom: Elsevier Ltd

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2
Validation of Structures in the Protein Data Bank
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Validation of Structures in the Protein Data Bank

Gore, Swanand ; Sanz García, Eduardo ; Hendrickx, Pieter M.S. ; Gutmanas, Aleksandras ; Westbrook, John D. ; Yang, Huanwang ; Feng, Zukang ; Baskaran, Kumaran ; Berrisford, John M. ; Hudson, Brian P. ; Ikegawa, Yasuyo ; Kobayashi, Naohiro ; Lawson, Catherine L. ; Mading, Steve ; Mak, Lora ; Mukhopadhyay, Abhik ; Oldfield, Thomas J. ; Patwardhan, Ardan ; Peisach, Ezra ; Sahni, Gaurav ; Sekharan, Monica R. ; Sen, Sanchayita ; Shao, Chenghua ; Smart, Oliver S. ; Ulrich, Eldon L. ; Yamashita, Reiko ; Quesada, Martha ; Young, Jasmine Y. ; Nakamura, Haruki ; Markley, John L. ; Berman, Helen M. ; Burley, Stephen K. ; Velankar, Sameer ; Kleywegt, Gerard J.

Structure (London), 2017-12, Vol.25 (12), p.1916-1927 [Periódico revisado por pares]

United States: Elsevier Ltd

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3
RCSB Protein Data Bank: Celebrating 50 years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D
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RCSB Protein Data Bank: Celebrating 50 years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D

Burley, Stephen K. ; Bhikadiya, Charmi ; Bi, Chunxiao ; Bittrich, Sebastian ; Chen, Li ; Crichlow, Gregg V. ; Duarte, Jose M. ; Dutta, Shuchismita ; Fayazi, Maryam ; Feng, Zukang ; Flatt, Justin W. ; Ganesan, Sai J. ; Goodsell, David S. ; Ghosh, Sutapa ; Kramer Green, Rachel ; Guranovic, Vladimir ; Henry, Jeremy ; Hudson, Brian P. ; Lawson, Catherine L. ; Liang, Yuhe ; Lowe, Robert ; Peisach, Ezra ; Persikova, Irina ; Piehl, Dennis W. ; Rose, Yana ; Sali, Andrej ; Segura, Joan ; Sekharan, Monica ; Shao, Chenghua ; Vallat, Brinda ; Voigt, Maria ; Westbrook, John D. ; Whetstone, Shamara ; Young, Jasmine Y. ; Zardecki, Christine

Protein science, 2022-01, Vol.31 (1), p.187-208 [Periódico revisado por pares]

Hoboken, USA: John Wiley & Sons, Inc

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4
Simplified quality assessment for small-molecule ligands in the Protein Data Bank
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Simplified quality assessment for small-molecule ligands in the Protein Data Bank

Shao, Chenghua ; Westbrook, John D. ; Lu, Changpeng ; Bhikadiya, Charmi ; Peisach, Ezra ; Young, Jasmine Y. ; Duarte, Jose M. ; Lowe, Robert ; Wang, Sijian ; Rose, Yana ; Feng, Zukang ; Burley, Stephen K.

Structure (London), 2022-02, Vol.30 (2), p.252-262.e4 [Periódico revisado por pares]

United States: Elsevier Ltd

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5
Simplified quality assessment for small-molecule ligands in the Protein Data Bank
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Simplified quality assessment for small-molecule ligands in the Protein Data Bank

Shao, Chenghua ; Westbrook, John D. ; Lu, Changpeng ; Bhikadiya, Charmi ; Peisach, Ezra ; Young, Jasmine Y. ; Duarte, Jose M. ; Lowe, Robert ; Wang, Sijian ; Rose, Yana ; Feng, Zukang ; Burley, Stephen K.

Structure (London), 2022-02, Vol.30 (2) [Periódico revisado por pares]

United Kingdom: Elsevier

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6
Multivariate Analyses of Quality Metrics for Crystal Structures in the PDB Archive
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Multivariate Analyses of Quality Metrics for Crystal Structures in the PDB Archive

Shao, Chenghua ; Yang, Huanwang ; Westbrook, John D. ; Young, Jasmine Y. ; Zardecki, Christine ; Burley, Stephen K.

Structure (London), 2017-03, Vol.25 (3), p.458-468 [Periódico revisado por pares]

United States: Elsevier Ltd

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7
RCSB Protein Data bank: Tools for visualizing and understanding biological macromolecules in 3D
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Artigo
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RCSB Protein Data bank: Tools for visualizing and understanding biological macromolecules in 3D

Burley, Stephen K. ; Bhikadiya, Charmi ; Bi, Chunxiao ; Bittrich, Sebastian ; Chao, Henry ; Chen, Li ; Craig, Paul A. ; Crichlow, Gregg V. ; Dalenberg, Kenneth ; Duarte, Jose M. ; Dutta, Shuchismita ; Fayazi, Maryam ; Feng, Zukang ; Flatt, Justin W. ; Ganesan, Sai J. ; Ghosh, Sutapa ; Goodsell, David S. ; Green, Rachel Kramer ; Guranovic, Vladimir ; Henry, Jeremy ; Hudson, Brian P. ; Khokhriakov, Igor ; Lawson, Catherine L. ; Liang, Yuhe ; Lowe, Robert ; Peisach, Ezra ; Persikova, Irina ; Piehl, Dennis W. ; Rose, Yana ; Sali, Andrej ; Segura, Joan ; Sekharan, Monica ; Shao, Chenghua ; Vallat, Brinda ; Voigt, Maria ; Webb, Benjamin ; Westbrook, John D. ; Whetstone, Shamara ; Young, Jasmine Y. ; Zalevsky, Arthur ; Zardecki, Christine

Protein science, 2022-12, Vol.31 (12), p.e4482-n/a [Periódico revisado por pares]

Hoboken, USA: John Wiley & Sons, Inc

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8
RCSB Protein Data Bank: Enabling biomedical research and drug discovery
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Artigo
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RCSB Protein Data Bank: Enabling biomedical research and drug discovery

Goodsell, David S. ; Zardecki, Christine ; Di Costanzo, Luigi ; Duarte, Jose M. ; Hudson, Brian P. ; Persikova, Irina ; Segura, Joan ; Shao, Chenghua ; Voigt, Maria ; Westbrook, John D. ; Young, Jasmine Y. ; Burley, Stephen K.

Protein science, 2019-09, Vol.29 (1) [Periódico revisado por pares]

United States: The Protein Society

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9
RCSB Protein Data Bank: Celebrating 50 years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D
Material Type:
Artigo
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RCSB Protein Data Bank: Celebrating 50 years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D

Burley, Stephen K. ; Bhikadiya, Charmi ; Bi, Chunxiao ; Bittrich, Sebastian ; Chen, Li ; Crichlow, Gregg V. ; Duarte, Jose M. ; Dutta, Shuchismita ; Fayazi, Maryam ; Feng, Zukang ; Flatt, Justin W. ; Ganesan, Sai J. ; Goodsell, David S. ; Ghosh, Sutapa ; Kramer Green, Rachel ; Guranovic, Vladimir ; Henry, Jeremy ; Hudson, Brian P. ; Lawson, Catherine L. ; Liang, Yuhe ; Lowe, Robert ; Peisach, Ezra ; Persikova, Irina ; Piehl, Dennis W. ; Rose, Yana ; Sali, Andrej ; Segura, Joan ; Sekharan, Monica ; Shao, Chenghua ; Vallat, Brinda ; Voigt, Maria ; Westbrook, John D. ; Whetstone, Shamara ; Young, Jasmine Y. ; Zardecki, Christine

Protein science, 2021-10, Vol.31 (1) [Periódico revisado por pares]

United States: Wiley

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10
RCSB Protein Data bank: Tools for visualizing and understanding biological macromolecules in 3D
Material Type:
Artigo
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RCSB Protein Data bank: Tools for visualizing and understanding biological macromolecules in 3D

Burley, Stephen K ; Bhikadiya, Charmi ; Bi, Chunxiao ; Bittrich, Sebastian ; Chao, Henry ; Chen, Li ; Craig, Paul A ; Crichlow, Gregg V ; Dalenberg, Kenneth ; Duarte, Jose M ; Dutta, Shuchismita ; Fayazi, Maryam ; Feng, Zukang ; Flatt, Justin W ; Ganesan, Sai J ; Ghosh, Sutapa ; Goodsell, David S ; Green, Rachel Kramer ; Guranovic, Vladimir ; Henry, Jeremy ; Hudson, Brian P ; Khokhriakov, Igor ; Lawson, Catherine L ; Liang, Yuhe ; Lowe, Robert ; Peisach, Ezra ; Persikova, Irina ; Piehl, Dennis W ; Rose, Yana ; Sali, Andrej ; Segura, Joan ; Sekharan, Monica ; Shao, Chenghua ; Vallat, Brinda ; Voigt, Maria ; Webb, Benjamin ; Westbrook, John D ; Whetstone, Shamara ; Young, Jasmine Y ; Zalevsky, Arthur ; Zardecki, Christine

Protein Science, 2022-12, Vol.31 (12)

eScholarship, University of California

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