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1
Detecting DNA double-stranded breaks in mammalian genomes by linear amplification-mediated high-throughput genome-wide translocation sequencing
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Artigo
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Detecting DNA double-stranded breaks in mammalian genomes by linear amplification-mediated high-throughput genome-wide translocation sequencing

Hu, Jiazhi ; Meyers, Robin M ; Dong, Junchao ; Panchakshari, Rohit A ; Alt, Frederick W ; Frock, Richard L

Nature protocols, 2016-05, Vol.11 (5), p.853-871 [Periódico revisado por pares]

England: Nature Publishing Group

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2
Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution
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Artigo
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Genome sequence of cultivated Upland cotton (Gossypium hirsutum TM-1) provides insights into genome evolution

Li, Fuguang ; Fan, Guangyi ; Lu, Cairui ; Xiao, Guanghui ; Zou, Changsong ; Kohel, Russell J ; Ma, Zhiying ; Shang, Haihong ; Ma, Xiongfeng ; Wu, Jianyong ; Liang, Xinming ; Huang, Gai ; Percy, Richard G ; Liu, Kun ; Yang, Weihua ; Chen, Wenbin ; Du, Xiongming ; Shi, Chengcheng ; Yuan, Youlu ; Ye, Wuwei ; Liu, Xin ; Zhang, Xueyan ; Liu, Weiqing ; Wei, Hengling ; Wei, Shoujun ; Huang, Guodong ; Zhang, Xianlong ; Zhu, Shuijin ; Zhang, He ; Sun, Fengming ; Wang, Xingfen ; Liang, Jie ; Wang, Jiahao ; He, Qiang ; Huang, Leihuan ; Wang, Jun ; Cui, Jinjie ; Song, Guoli ; Wang, Kunbo ; Xu, Xun ; Yu, John Z ; Zhu, Yuxian ; Yu, Shuxun

Nature biotechnology, 2015-05, Vol.33 (5), p.524-530 [Periódico revisado por pares]

United States: Nature Publishing Group

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3
Ensembl Genomes 2016: more genomes, more complexity
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Artigo
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Ensembl Genomes 2016: more genomes, more complexity

Kersey, Paul Julian ; Allen, James E ; Armean, Irina ; Boddu, Sanjay ; Bolt, Bruce J ; Carvalho-Silva, Denise ; Christensen, Mikkel ; Davis, Paul ; Falin, Lee J ; Grabmueller, Christoph ; Humphrey, Jay ; Kerhornou, Arnaud ; Khobova, Julia ; Aranganathan, Naveen K ; Langridge, Nicholas ; Lowy, Ernesto ; McDowall, Mark D ; Maheswari, Uma ; Nuhn, Michael ; Ong, Chuang Kee ; Overduin, Bert ; Paulini, Michael ; Pedro, Helder ; Perry, Emily ; Spudich, Giulietta ; Tapanari, Electra ; Walts, Brandon ; Williams, Gareth ; Tello-Ruiz, Marcela ; Stein, Joshua ; Wei, Sharon ; Ware, Doreen ; Bolser, Daniel M ; Howe, Kevin L ; Kulesha, Eugene ; Lawson, Daniel ; Maslen, Gareth ; Staines, Daniel M

Nucleic acids research, 2016-01, Vol.44 (D1), p.D574-D580 [Periódico revisado por pares]

England: Oxford University Press

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4
Analysis of the bread wheat genome using whole―genome shotgun sequencing
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Artigo
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Analysis of the bread wheat genome using whole―genome shotgun sequencing

BRENCHLEY, Rachel ; SPANNAGL, Manuel ; KAY, Suzanne ; WAITE, Darren ; TRICK, Martin ; BANCROFT, Ian ; YONG GU ; NAXIN HUO ; LUO, Ming-Cheng ; SEHGAL, Sunish ; GILL, Bikram ; KIANIAN, Sharyar ; PFEIFER, Matthias ; ANDERSON, Olin ; KERSEY, Paul ; DVORAK, Jan ; MCCOMBIE, W. Richard ; HALL, Anthony ; MAYER, Klaus F. X ; EDWARDS, Keith J ; BEVAN, Michael W ; HALL, Neil ; BARKER, Gary L. A ; D'AMORE, Rosalinda ; ALLEN, Alexandra M ; MCKENZIE, Neil ; KRAMER, Melissa ; KERHORNOU, Arnaud ; BOLSER, Dan

Nature (London), 2012-11, Vol.491 (7426), p.705-710 [Periódico revisado por pares]

London: Nature Publishing Group

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5
Ensembl Genomes 2016: more genomes, more complexity
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Artigo
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Ensembl Genomes 2016: more genomes, more complexity

Kersey, Paul Julian ; Allen, James E. ; Armean, Irina ; Boddu, Sanjay ; Bolt, Bruce J. ; Carvalho-Silva, Denise ; Christensen, Mikkel ; Davis, Paul ; Falin, Lee J. ; Grabmueller, Christoph ; Humphrey, Jay ; Kerhornou, Arnaud ; Khobova, Julia ; Aranganathan, Naveen K. ; Langridge, Nicholas ; Lowy, Ernesto ; McDowall, Mark D. ; Maheswari, Uma ; Nuhn, Michael ; Ong, Chuang Kee ; Overduin, Bert ; Paulini, Michael ; Pedro, Helder ; Perry, Emily ; Spudich, Giulietta ; Tapanari, Electra ; Walts, Brandon ; Williams, Gareth ; Tello–Ruiz, Marcela ; Stein, Joshua ; Wei, Sharon ; Ware, Doreen ; Bolser, Daniel M. ; Howe, Kevin L. ; Kulesha, Eugene ; Lawson, Daniel ; Maslen, Gareth ; Staines, Daniel M.

Nucleic acids research, 2016-01, Vol.44 (D1), p.D574-D580 [Periódico revisado por pares]

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6
Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes
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Artigo
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Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes

BIANKIN, Andrew V ; WADDELL, Nicola ; CHANG, David K ; COWLEY, Mark J ; GARDINER, Brooke B ; SONG, Sarah ; HARLIWONG, Ivon ; IDRISOGLU, Senel ; NOURSE, Craig ; NOURBAKHSH, Ehsan ; MANNING, Suzanne ; WANI, Shivangi ; KASSAHN, Karin S ; GONGORA, Milena ; PAJIC, Marina ; SCARIETT, Christopher J ; GILL, Anthony J ; PINHO, Andreia V ; ROOMAN, Ilse ; ANDERSON, Matthew ; HOMES, Oliver ; LEONARD, Conrad ; TAYLOR, Darrin ; GINGRAS, Marie-Claude ; WOOD, Scott ; QINYING XU ; NONES, Katia ; FINK, J. Lynn ; CHRIST, Angelika ; BRUXNER, Tim ; CLOONAN, Nicole ; KOLLE, Gabriel ; NEWELL, Felicity ; PINESE, Mark ; MUTHUSWAMY, Lakshmi B ; MEAD, R. Scott ; HUMPHRIS, Jeremy L ; KAPLAN, Warren ; JONES, Marc D ; COLVIN, Emily K ; NAGRIAL, Adnan M ; HUMPHREY, Emily S ; CHOU, Angela ; CHIN, Venessa T ; CHANTRILL, Lorraine A ; JOHNS, Amber L ; MAWSON, Amanda ; SAMRA, Jaswinder S ; KENCH, James G ; LOVELL, Jessica A ; DALY, Roger J ; MERRETT, Neil D ; TOON, Christopher ; EPARI, Krishna ; NGUYEN, Nam Q ; BARBOUR, Andrew ; MILLER, David K ; WILSON, Peter J ; PATCH, Ann-Marie ; JIANMIN WU

Nature (London), 2012-11, Vol.491 (7424), p.399-405 [Periódico revisado por pares]

London: Nature Publishing Group

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7
NCBI viral genomes resource
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Artigo
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NCBI viral genomes resource

Brister, J Rodney ; Ako-Adjei, Danso ; Bao, Yiming ; Blinkova, Olga

Nucleic acids research, 2015-01, Vol.43 (Database issue), p.D571-D577 [Periódico revisado por pares]

England: Oxford University Press

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8
De novo assembly and annotation of the CHOZN® GS−/− genome supports high‐throughput genome‐scale screening
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De novo assembly and annotation of the CHOZN® GS−/− genome supports high‐throughput genome‐scale screening

Kretzmer, Corey ; Narasimhan, Rajagopalan Lakshmi ; Lal, Rahul Deva ; Balassi, Vincent ; Ravellette, James ; Kotekar Manjunath, Ajaya Kumar ; Koshy, Jesvin Joy ; Viano, Marta ; Torre, Serena ; Zanda, Valeria M. ; Kumravat, Mausam ; Saldanha, Keith Metelo Raul ; Chandranpillai, Harikrishnan ; Nihad, Ifra ; Zhong, Fei ; Sun, Yi ; Gustin, Jason ; Borgschulte, Trissa ; Liu, Jiajian ; Razafsky, David

Biotechnology and bioengineering, 2022-12, Vol.119 (12), p.3632-3646 [Periódico revisado por pares]

United States: Wiley Subscription Services, Inc

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9
GenDB—an open source genome annotation system for prokaryote genomes
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GenDB—an open source genome annotation system for prokaryote genomes

Meyer, Folker ; Goesmann, Alexander ; McHardy, Alice C. ; Bartels, Daniela ; Bekel, Thomas ; Clausen, Jörn ; Kalinowski, Jörn ; Linke, Burkhard ; Rupp, Oliver ; Giegerich, Robert ; Pühler, Alfred

Nucleic acids research, 2003-04, Vol.31 (8), p.2187-2195 [Periódico revisado por pares]

England: Oxford University Press

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10
Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach
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Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach

Hahn, Christoph ; Bachmann, Lutz ; Chevreux, Bastien

Nucleic acids research, 2013-07, Vol.41 (13), p.e129-e129 [Periódico revisado por pares]

England: Oxford University Press

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