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11
The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum
The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum
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The first near-complete assembly of the hexaploid bread wheat genome, Triticum aestivum

Zimin, Aleksey V ; Puiu, Daniela ; Hall, Richard ; Kingan, Sarah ; Clavijo, Bernardo J ; Salzberg, Steven L

Gigascience, 2017-11, Vol.6 (11), p.1-7 [Periódico revisado por pares]

United States: Oxford University Press

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12
RaGOO: fast and accurate reference-guided scaffolding of draft genomes
RaGOO: fast and accurate reference-guided scaffolding of draft genomes
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RaGOO: fast and accurate reference-guided scaffolding of draft genomes

Alonge, Michael ; Soyk, Sebastian ; Ramakrishnan, Srividya ; Wang, Xingang ; Goodwin, Sara ; Sedlazeck, Fritz J ; Lippman, Zachary B ; Schatz, Michael C

Genome Biology, 2019-10, Vol.20 (1), p.224-224, Article 224 [Periódico revisado por pares]

England: BioMed Central Ltd

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13
The complete sequence of a human genome
The complete sequence of a human genome
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The complete sequence of a human genome

Nurk, Sergey ; Koren, Sergey ; Rhie, Arang ; Rautiainen, Mikko ; Bzikadze, Andrey V ; Mikheenko, Alla ; Vollger, Mitchell R ; Altemose, Nicolas ; Uralsky, Lev ; Gershman, Ariel ; Aganezov, Sergey ; Hoyt, Savannah J ; Diekhans, Mark ; Logsdon, Glennis A ; Alonge, Michael ; Antonarakis, Stylianos E ; Borchers, Matthew ; Bouffard, Gerard G ; Brooks, Shelise Y ; Caldas, Gina V ; Chen, Nae-Chyun ; Cheng, Haoyu ; Chin, Chen-Shan ; Chow, William ; de Lima, Leonardo G ; Dishuck, Philip C ; Durbin, Richard ; Dvorkina, Tatiana ; Fiddes, Ian T ; Formenti, Giulio ; Fulton, Robert S ; Fungtammasan, Arkarachai ; Garrison, Erik ; Grady, Patrick G S ; Graves-Lindsay, Tina A ; Hall, Ira M ; Hansen, Nancy F ; Hartley, Gabrielle A ; Haukness, Marina ; Howe, Kerstin ; Hunkapiller, Michael W ; Jain, Chirag ; Jain, Miten ; Jarvis, Erich D ; Kerpedjiev, Peter ; Kirsche, Melanie ; Kolmogorov, Mikhail ; Korlach, Jonas ; Kremitzki, Milinn ; Li, Heng ; Maduro, Valerie V ; Marschall, Tobias ; McCartney, Ann M ; McDaniel, Jennifer ; Miller, Danny E ; Mullikin, James C ; Myers, Eugene W ; Olson, Nathan D ; Paten, Benedict ; Peluso, Paul ; Pevzner, Pavel A ; Porubsky, David ; Potapova, Tamara ; Rogaev, Evgeny I ; Rosenfeld, Jeffrey A ; Salzberg, Steven L ; Schneider, Valerie A ; Sedlazeck, Fritz J ; Shafin, Kishwar ; Shew, Colin J ; Shumate, Alaina ; Sims, Ying ; Smit, Arian F A ; Soto, Daniela C ; Sović, Ivan ; Storer, Jessica M ; Streets, Aaron ; Sullivan, Beth A ; Thibaud-Nissen, Françoise ; Torrance, James ; Wagner, Justin ; Walenz, Brian P ; Wenger, Aaron ; Wood, Jonathan M D ; Xiao, Chunlin ; Yan, Stephanie M ; Young, Alice C ; Zarate, Samantha ; Surti, Urvashi ; McCoy, Rajiv C ; Dennis, Megan Y ; Alexandrov, Ivan A ; Gerton, Jennifer L ; O'Neill, Rachel J ; Timp, Winston ; Zook, Justin M ; Schatz, Michael C ; Eichler, Evan E ; Miga, Karen H ; Phillippy, Adam M

Science (American Association for the Advancement of Science), 2022-04, Vol.376 (6588), p.44-53 [Periódico revisado por pares]

United States: The American Association for the Advancement of Science

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14
Genomic Analysis in the Age of Human Genome Sequencing
Genomic Analysis in the Age of Human Genome Sequencing
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Genomic Analysis in the Age of Human Genome Sequencing

Lappalainen, Tuuli ; Scott, Alexandra J. ; Brandt, Margot ; Hall, Ira M.

Cell, 2019-03, Vol.177 (1), p.70-84 [Periódico revisado por pares]

United States: Elsevier Inc

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15
BUSCO Update: Novel and Streamlined Workflows along with Broader and Deeper Phylogenetic Coverage for Scoring of Eukaryotic, Prokaryotic, and Viral Genomes
BUSCO Update: Novel and Streamlined Workflows along with Broader and Deeper Phylogenetic Coverage for Scoring of Eukaryotic, Prokaryotic, and Viral Genomes
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BUSCO Update: Novel and Streamlined Workflows along with Broader and Deeper Phylogenetic Coverage for Scoring of Eukaryotic, Prokaryotic, and Viral Genomes

Manni, Mosè ; Berkeley, Matthew R ; Seppey, Mathieu ; Simão, Felipe A ; Zdobnov, Evgeny M Kelley, Joanna

Molecular biology and evolution, 2021-10, Vol.38 (10), p.4647-4654 [Periódico revisado por pares]

United States: Oxford University Press

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16
Imputation to whole-genome sequence using multiple pig populations and its use in genome-wide association studies
Imputation to whole-genome sequence using multiple pig populations and its use in genome-wide association studies
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Imputation to whole-genome sequence using multiple pig populations and its use in genome-wide association studies

van den Berg, Sanne ; Vandenplas, Jérémie ; van Eeuwijk, Fred A ; Bouwman, Aniek C ; Lopes, Marcos S ; Veerkamp, Roel F

Genetics selection evolution (Paris), 2019-01, Vol.51 (1), p.2-2, Article 2 [Periódico revisado por pares]

France: BioMed Central Ltd

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17
SyRI: finding genomic rearrangements and local sequence differences from whole-genome assemblies
SyRI: finding genomic rearrangements and local sequence differences from whole-genome assemblies
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SyRI: finding genomic rearrangements and local sequence differences from whole-genome assemblies

Goel, Manish ; Sun, Hequan ; Jiao, Wen-Biao ; Schneeberger, Korbinian

Genome Biology, 2019-12, Vol.20 (1), p.277-277, Article 277 [Periódico revisado por pares]

England: BioMed Central Ltd

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18
Reconstruction of the ancestral plastid genome in Geraniaceae reveals a correlation between genome rearrangements, repeats, and nucleotide substitution rates
Reconstruction of the ancestral plastid genome in Geraniaceae reveals a correlation between genome rearrangements, repeats, and nucleotide substitution rates
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Reconstruction of the ancestral plastid genome in Geraniaceae reveals a correlation between genome rearrangements, repeats, and nucleotide substitution rates

Weng, Mao-Lun ; Blazier, John C ; Govindu, Madhumita ; Jansen, Robert K

Molecular biology and evolution, 2014-03, Vol.31 (3), p.645-659 [Periódico revisado por pares]

United States: Oxford Publishing Limited (England)

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19
Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing
Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing
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Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing

Alonge, Michael ; Lebeigle, Ludivine ; Kirsche, Melanie ; Jenike, Katie ; Ou, Shujun ; Aganezov, Sergey ; Wang, Xingang ; Lippman, Zachary B ; Schatz, Michael C ; Soyk, Sebastian

Genome Biology, 2022-12, Vol.23 (1), p.258-258 [Periódico revisado por pares]

England: BioMed Central Ltd

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20
Trycycler: consensus long-read assemblies for bacterial genomes
Trycycler: consensus long-read assemblies for bacterial genomes
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Trycycler: consensus long-read assemblies for bacterial genomes

Wick, Ryan R ; Judd, Louise M ; Cerdeira, Louise T ; Hawkey, Jane ; Méric, Guillaume ; Vezina, Ben ; Wyres, Kelly L ; Holt, Kathryn E

Genome Biology, 2021-09, Vol.22 (1), p.266-266, Article 266 [Periódico revisado por pares]

England: BioMed Central Ltd

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