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1
Sampling alternative conformational states of transporters and receptors with AlphaFold2
Material Type:
Article
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Sampling alternative conformational states of transporters and receptors with AlphaFold2

Del Alamo, Diego ; Sala, Davide ; Mchaourab, Hassane S ; Meiler, Jens

eLife, 2022-03, Vol.11 [Peer Reviewed Journal]

England: eLife Sciences Publications, Ltd

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2
Improving homology modeling from low-sequence identity templates in Rosetta: A case study in GPCRs
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Article
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Improving homology modeling from low-sequence identity templates in Rosetta: A case study in GPCRs

Bender, Brian Joseph ; Marlow, Brennica ; Meiler, Jens Kasson, Peter M.

PLoS computational biology, 2020-10, Vol.16 (10), p.e1007597-e1007597 [Peer Reviewed Journal]

United States: Public Library of Science

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3
Prediction of amphipathic helix-membrane interactions with Rosetta
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Article
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Prediction of amphipathic helix-membrane interactions with Rosetta

Gulsevin, Alican ; Meiler, Jens Fleishman, Sarel Jacob

PLoS computational biology, 2021-03, Vol.17 (3), p.e1008818 [Peer Reviewed Journal]

United States: Public Library of Science

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4
Fully Flexible Docking of Medium Sized Ligand Libraries with RosettaLigand
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Article
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Fully Flexible Docking of Medium Sized Ligand Libraries with RosettaLigand

DeLuca, Samuel ; Khar, Karen ; Meiler, Jens Zhang, Yang

PloS one, 2015-07, Vol.10 (7), p.e0132508-e0132508 [Peer Reviewed Journal]

United States: Public Library of Science

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5
Assessing multiple score functions in Rosetta for drug discovery
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Article
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Assessing multiple score functions in Rosetta for drug discovery

Smith, Shannon T ; Meiler, Jens Gallicchio, Emilio

PloS one, 2020-10, Vol.15 (10), p.e0240450-e0240450 [Peer Reviewed Journal]

United States: Public Library of Science

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6
Towards ligand docking including explicit interface water molecules
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Article
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Towards ligand docking including explicit interface water molecules

Lemmon, Gordon ; Meiler, Jens Levy, Yaakov Koby

PloS one, 2013-06, Vol.8 (6), p.e67536-e67536 [Peer Reviewed Journal]

United States: Public Library of Science

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7
Opportunities and challenges in the discovery of allosteric modulators of GPCRs for treating CNS disorders
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Article
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Opportunities and challenges in the discovery of allosteric modulators of GPCRs for treating CNS disorders

Conn, P Jeffrey ; Lindsley, Craig W ; Meiler, Jens ; Niswender, Colleen M

Nature reviews. Drug discovery, 2014-09, Vol.13 (9), p.692-708 [Peer Reviewed Journal]

England: Nature Publishing Group

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8
Potently neutralizing and protective human antibodies against SARS-CoV-2
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Article
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Potently neutralizing and protective human antibodies against SARS-CoV-2

Zost, Seth J ; Gilchuk, Pavlo ; Case, James Brett ; Binshtein, Elad ; Chen, Rita E ; Nkolola, Joseph P ; Schäfer, Alexandra ; Reidy, Joseph X ; Trivette, Andrew ; Nargi, Rachel S ; Sutton, Rachel E ; Suryadevara, Naveenchandra ; Martinez, David R ; Williamson, Lauren E ; Chen, Elaine C ; Jones, Taylor ; Day, Samuel ; Myers, Luke ; Hassan, Ahmed O ; Kafai, Natasha M ; Winkler, Emma S ; Fox, Julie M ; Shrihari, Swathi ; Mueller, Benjamin K ; Meiler, Jens ; Chandrashekar, Abishek ; Mercado, Noe B ; Steinhardt, James J ; Ren, Kuishu ; Loo, Yueh-Ming ; Kallewaard, Nicole L ; McCune, Broc T ; Keeler, Shamus P ; Holtzman, Michael J ; Barouch, Dan H ; Gralinski, Lisa E ; Baric, Ralph S ; Thackray, Larissa B ; Diamond, Michael S ; Carnahan, Robert H ; Crowe, Jr, James E

Nature (London), 2020-08, Vol.584 (7821), p.443-449 [Peer Reviewed Journal]

England: Nature Publishing Group

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9
Structure of a Class C GPCR Metabotropic Glutamate Receptor 1 Bound to an Allosteric Modulator
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Article
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Structure of a Class C GPCR Metabotropic Glutamate Receptor 1 Bound to an Allosteric Modulator

Wu, Huixian ; Wang, Chong ; Gregory, Karen J. ; Han, Gye Won ; Cho, Hyekyung P. ; Xia, Yan ; Niswender, Colleen M. ; Katritch, Vsevolod ; Meiler, Jens ; Cherezov, Vadim ; Conn, P. Jeffrey ; Stevens, Raymond C.

Science, 2014-04, Vol.344 (6179), p.58-64 [Peer Reviewed Journal]

United States: American Association for the Advancement of Science

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10
Rosetta design with co-evolutionary information retains protein function
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Article
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Rosetta design with co-evolutionary information retains protein function

Schmitz, Samuel ; Ertelt, Moritz ; Merkl, Rainer ; Meiler, Jens Wallqvist, Anders

PLoS computational biology, 2021-01, Vol.17 (1), p.e1008568-e1008568 [Peer Reviewed Journal]

United States: Public Library of Science

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