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1
Assessing the evolutionary impact of amino acid mutations in the human genome
Assessing the evolutionary impact of amino acid mutations in the human genome
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Assessing the evolutionary impact of amino acid mutations in the human genome

Boyko, Adam R ; Williamson, Scott H ; Indap, Amit R ; Degenhardt, Jeremiah D ; Hernandez, Ryan D ; Lohmueller, Kirk E ; Adams, Mark D ; Schmidt, Steffen ; Sninsky, John J ; Sunyaev, Shamil R ; White, Thomas J ; Nielsen, Rasmus ; Clark, Andrew G ; Bustamante, Carlos D Schierup, Mikkel H.

PLoS genetics, 2008-05, Vol.4 (5), p.e1000083-e1000083 [Revista revisada por pares]

United States: Public Library of Science

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2
Complex population structure in African village dogs and its implications for inferring dog domestication history
Complex population structure in African village dogs and its implications for inferring dog domestication history
Material Type:
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Complex population structure in African village dogs and its implications for inferring dog domestication history

Boyko, Adam R ; Boyko, Ryan H ; Boyko, Corin M ; Parker, Heidi G ; Castelhano, Marta ; Corey, Liz ; Degenhardt, Jeremiah D ; Auton, Adam ; Hedimbi, Marius ; Kityo, Robert ; Ostrander, Elaine A ; Schoenebeck, Jeffrey ; Todhunter, Rory J ; Jones, Paul ; Bustamante, Carlos D

Proceedings of the National Academy of Sciences - PNAS, 2009-08, Vol.106 (33), p.13903-13908 [Revista revisada por pares]

United States: National Academy of Sciences

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3
COBRA™: a highly potent conditionally active T cell engager engineered for the treatment of solid tumors
COBRA™: a highly potent conditionally active T cell engager engineered for the treatment of solid tumors
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COBRA™: a highly potent conditionally active T cell engager engineered for the treatment of solid tumors

Panchal, Anand ; Seto, Pui ; Wall, Russell ; Hillier, Brian J ; Zhu, Ying ; Krakow, Jessica ; Datt, Aakash ; Pongo, Elizabeth ; Bagheri, Andisheh ; Chen, Tseng-Hui T ; Degenhardt, Jeremiah D ; Culp, Patricia A ; Dettling, Danielle E ; Vinogradova, Maia V ; May, Chad ; DuBridge, Robert B

mAbs, 2020-01, Vol.12 (1), p.1792130-1792130 [Revista revisada por pares]

United States: Taylor & Francis

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4
Global distribution of genomic diversity underscores rich complex history of continental human populations
Global distribution of genomic diversity underscores rich complex history of continental human populations
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Global distribution of genomic diversity underscores rich complex history of continental human populations

Auton, Adam ; Bryc, Katarzyna ; Boyko, Adam R ; Lohmueller, Kirk E ; Novembre, John ; Reynolds, Andy ; Indap, Amit ; Wright, Mark H ; Degenhardt, Jeremiah D ; Gutenkunst, Ryan N ; King, Karen S ; Nelson, Matthew R ; Bustamante, Carlos D

Genome Research, 2009-05, Vol.19 (5), p.795-803 [Revista revisada por pares]

United States: Cold Spring Harbor Laboratory Press

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5
Population Genetic Inference from Personal Genome Data: Impact of Ancestry and Admixture on Human Genomic Variation
Population Genetic Inference from Personal Genome Data: Impact of Ancestry and Admixture on Human Genomic Variation
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Population Genetic Inference from Personal Genome Data: Impact of Ancestry and Admixture on Human Genomic Variation

KIDD, Jeffrey M ; GRAVEL, Simon ; MCLAUGHLIN, Stephen F ; PECKHAM, Heather E ; OMBERG, Larsson ; BORMANN CHUNG, Christina A ; STANLEY, Sarah ; PEARLSTEIN, Kevin ; LEVANDOWSKY, Elizabeth ; ACEVEDO-ACEVEDO, Suehelay ; AUTON, Adam ; KEINAN, Alon ; BYRNES, Jake ; ACUNA-ALONZO, Victor ; BARQUERA-LOZANO, Rodrigo ; CANIZALES-QUINTEROS, Samuel ; ENG, Celeste ; BURCHARD, Esteban G ; RUSSELL, Archie ; REYNOLDS, Andy ; CLARK, Andrew G ; REESE, Martin G ; LINCOLN, Stephen E ; MORENO-ESTRADA, Andres ; BUTTE, Atul J ; DE LA VEGA, Francisco M ; BUSTAMANTE, Carlos D ; MUSHAROFF, Shaila ; BRYC, Katarzyna ; DEGENHARDT, Jeremiah D ; BRISBIN, Abra ; SHETH, Vrunda ; RONG CHEN

American journal of human genetics, 2012-10, Vol.91 (4), p.660-671 [Revista revisada por pares]

Cambridge, MA: Cell Press

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6
Copy number variation of CCL3-like genes affects rate of progression to simian-AIDS in Rhesus Macaques (Macaca mulatta)
Copy number variation of CCL3-like genes affects rate of progression to simian-AIDS in Rhesus Macaques (Macaca mulatta)
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Copy number variation of CCL3-like genes affects rate of progression to simian-AIDS in Rhesus Macaques (Macaca mulatta)

Degenhardt, Jeremiah D ; de Candia, Paola ; Chabot, Adrien ; Schwartz, Stuart ; Henderson, Les ; Ling, Binhua ; Hunter, Meredith ; Jiang, Zhaoshi ; Palermo, Robert E ; Katze, Michael ; Eichler, Evan E ; Ventura, Mario ; Rogers, Jeffrey ; Marx, Preston ; Gilad, Yoav ; Bustamante, Carlos D Malik, Harmit S.

PLoS genetics, 2009-01, Vol.5 (1), p.e1000346-e1000346 [Revista revisada por pares]

United States: Public Library of Science

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7
Regression of EGFR positive established solid tumors in mice with the conditionally active T cell engager TAK-186
Regression of EGFR positive established solid tumors in mice with the conditionally active T cell engager TAK-186
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Regression of EGFR positive established solid tumors in mice with the conditionally active T cell engager TAK-186

Dettling, Danielle E ; Kwok, Eilene ; Quach, Lucy ; Datt, Aakash ; Degenhardt, Jeremiah D ; Panchal, Anand ; Seto, Pui ; Krakow, Jessica L ; Wall, Russell ; Hillier, Brian J ; Zhu, Ying ; Vinogradova, Maia ; DuBridge, Robert B ; May, Chad

Journal for immunotherapy of cancer, 2022-06, Vol.10 (6), p.e004336 [Revista revisada por pares]

London: BMJ Publishing Group Ltd

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8
Population genomic analysis reveals a rich speciation and demographic history of orang-utans (Pongo pygmaeus and Pongo abelii)
Population genomic analysis reveals a rich speciation and demographic history of orang-utans (Pongo pygmaeus and Pongo abelii)
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Population genomic analysis reveals a rich speciation and demographic history of orang-utans (Pongo pygmaeus and Pongo abelii)

Ma, Xin ; Kelley, Joanna L ; Eilertson, Kirsten ; Musharoff, Shaila ; Degenhardt, Jeremiah D ; Martins, André L ; Vinar, Tomas ; Kosiol, Carolin ; Siepel, Adam ; Gutenkunst, Ryan N ; Bustamante, Carlos D Kayser, Manfred

PloS one, 2013-10, Vol.8 (10), p.e77175-e77175 [Revista revisada por pares]

United States: Public Library of Science

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9
Recurrent R-spondin fusions in colon cancer
Recurrent R-spondin fusions in colon cancer
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Recurrent R-spondin fusions in colon cancer

SESHAGIRI, Somasekar ; STAWISKI, Eric W ; GUILLORY, Joseph ; HA, Connie ; DIJKGRAAF, Gerrit J. P ; STINSON, Jeremy ; GNAD, Florian ; HUNTLEY, Melanie A ; DEGENHARDT, Jeremiah D ; HAVERTY, Peter M ; BOURGON, Richard ; WEIRU WANG ; DURINCK, Steffen ; KOEPPEN, Hartmut ; GENTLEMAN, Robert ; STARR, Timothy K ; ZEMIN ZHANG ; LARGAESPADA, David A ; WU, Thomas D ; SAUVAGE, Frederic J. De ; MODRUSAN, Zora ; STORM, Elaine E ; CONBOY, Caitlin B ; CHAUDHURI, Subhra ; YINGHUI GUAN ; JANAKIRAMAN, Vasantharajan ; JAISWAL, Bijay S

Nature (London), 2012-08, Vol.488 (7413), p.660-664 [Revista revisada por pares]

London: Nature Publishing Group

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10
A simple genetic architecture underlies morphological variation in dogs
A simple genetic architecture underlies morphological variation in dogs
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A simple genetic architecture underlies morphological variation in dogs

Boyko, Adam R ; Quignon, Pascale ; Li, Lin ; Schoenebeck, Jeffrey J ; Degenhardt, Jeremiah D ; Lohmueller, Kirk E ; Zhao, Keyan ; Brisbin, Abra ; Parker, Heidi G ; vonHoldt, Bridgett M ; Cargill, Michele ; Auton, Adam ; Reynolds, Andy ; Elkahloun, Abdel G ; Castelhano, Marta ; Mosher, Dana S ; Sutter, Nathan B ; Johnson, Gary S ; Novembre, John ; Hubisz, Melissa J ; Siepel, Adam ; Wayne, Robert K ; Bustamante, Carlos D ; Ostrander, Elaine A Hoekstra, Hopi E.

PLoS Biology, 2010-08, Vol.8 (8), p.e1000451-e1000451 [Revista revisada por pares]

United States: Public Library of Science

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