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1
Alignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions
Alignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions
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Alignment-free genome comparison with feature frequency profiles (FFP) and optimal resolutions

Sims, Gregory E ; Jun, Se-Ran ; Wu, Guohong A ; Kim, Sung-Hou

Proceedings of the National Academy of Sciences - PNAS, 2009-02, Vol.106 (8), p.2677-2682 [Periódico revisado por pares]

United States: National Academy of Sciences

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2
Leveraging plastomes for comparative analysis and phylogenomic inference within Scutellarioideae (Lamiaceae)
Leveraging plastomes for comparative analysis and phylogenomic inference within Scutellarioideae (Lamiaceae)
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Leveraging plastomes for comparative analysis and phylogenomic inference within Scutellarioideae (Lamiaceae)

Zhao, Fei ; Li, Bo ; Drew, Bryan T ; Chen, Ya-Ping ; Wang, Qiang ; Yu, Wen-Bin ; Liu, En-De ; Salmaki, Yasaman ; Peng, Hua ; Xiang, Chun-Lei Sun, Genlou

PloS one, 2020-05, Vol.15 (5), p.e0232602-e0232602 [Periódico revisado por pares]

United States: Public Library of Science

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3
Muscle5: High-accuracy alignment ensembles enable unbiased assessments of sequence homology and phylogeny
Muscle5: High-accuracy alignment ensembles enable unbiased assessments of sequence homology and phylogeny
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Muscle5: High-accuracy alignment ensembles enable unbiased assessments of sequence homology and phylogeny

Edgar, Robert C

Nature communications, 2022-11, Vol.13 (1), p.6968-6968, Article 6968 [Periódico revisado por pares]

England: Nature Publishing Group UK

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4
A genome Tree of Life for the Fungi kingdom
A genome Tree of Life for the Fungi kingdom
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A genome Tree of Life for the Fungi kingdom

Choi, JaeJin ; Kim, Sung-Hou

Proceedings of the National Academy of Sciences - PNAS, 2017-08, Vol.114 (35), p.9391-9396 [Periódico revisado por pares]

United States: National Academy of Sciences

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5
The avocado genome informs deep angiosperm phylogeny, highlights introgressive hybridization, and reveals pathogen-influenced gene space adaptation
The avocado genome informs deep angiosperm phylogeny, highlights introgressive hybridization, and reveals pathogen-influenced gene space adaptation
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The avocado genome informs deep angiosperm phylogeny, highlights introgressive hybridization, and reveals pathogen-influenced gene space adaptation

Rendón-Anaya, Martha ; Ibarra-Laclette, Enrique ; Méndez-Bravo, Alfonso ; Lan, Tianying ; Zheng, Chunfang ; Carretero-Paulet, Lorenzo ; Perez-Torres, Claudia Anahí ; Chacón-López, Alejandra ; Hernandez-Guzmán, Gustavo ; Chang, Tien-Hao ; Farr, Kimberly M. ; Barbazuk, W. Brad ; Chamala, Srikar ; Mutwil, Marek ; Shivhare, Devendra ; Alvarez-Ponce, David ; Mitter, Neena ; Hayward, Alice ; Fletcher, Stephen ; Rozas, Julio ; Gracia, Alejandro Sánchez ; Kuhn, David ; Barrientos-Priego, Alejandro F. ; Salojärvi, Jarkko ; Librado, Pablo ; Sankoff, David ; Herrera-Estrella, Alfredo ; Albert, Victor A. ; Herrera-Estrella, Luis

Proceedings of the National Academy of Sciences - PNAS, 2019-08, Vol.116 (34), p.17081-17089 [Periódico revisado por pares]

United States: National Academy of Sciences

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6
two-domain tree of life is linked to a new root for the Archaea
two-domain tree of life is linked to a new root for the Archaea
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two-domain tree of life is linked to a new root for the Archaea

Raymann, Kasie ; Brochier-Armanet, Céline ; Gribaldo, Simonetta

Proceedings of the National Academy of Sciences - PNAS, 2015-05, Vol.112 (21), p.6670-6675 [Periódico revisado por pares]

United States: National Academy of Sciences

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7
Spider phylogenomics: untangling the Spider Tree of Life
Spider phylogenomics: untangling the Spider Tree of Life
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Spider phylogenomics: untangling the Spider Tree of Life

Garrison, Nicole L ; Rodriguez, Juanita ; Agnarsson, Ingi ; Coddington, Jonathan A ; Griswold, Charles E ; Hamilton, Christopher A ; Hedin, Marshal ; Kocot, Kevin M ; Ledford, Joel M ; Bond, Jason E

PeerJ (San Francisco, CA), 2016-02, Vol.4, p.e1719-e1719, Article e1719 [Periódico revisado por pares]

United States: PeerJ. Ltd

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8
butterfly plant arms-race escalated by gene and genome duplications
butterfly plant arms-race escalated by gene and genome duplications
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butterfly plant arms-race escalated by gene and genome duplications

Edger, Patrick P ; Hanna M. Heidel-Fischer ; Michaël Bekaert ; Jadranka Rota ; Gernot Glëöckner ; Adrian E. Platts ; David G. Heckel ; Joshua P. Der ; Eric K. Wafula ; Michelle Tang ; Johannes A. Hofberger ; Ann Smithson ; Jocelyn C. Hall ; Matthieu Blanchette ; Thomas E. Bureau ; Stephen I. Wright ; Claude W. dePamphilis ; M. Eric Schranz ; Michael S. Barker ; Gavin C. Conant ; Niklas Wahlberg ; Heiko Vogel ; J. Chris Pires ; Christopher W. Wheat

Proceedings of the National Academy of Sciences - PNAS, 2015-07, Vol.112 (27), p.8362-8366 [Periódico revisado por pares]

United States: National Academy of Sciences

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9
A quantitative framework reveals ecological drivers of grassland microbial community assembly in response to warming
A quantitative framework reveals ecological drivers of grassland microbial community assembly in response to warming
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A quantitative framework reveals ecological drivers of grassland microbial community assembly in response to warming

Ning, Daliang ; Yuan, Mengting ; Wu, Linwei ; Zhang, Ya ; Guo, Xue ; Zhou, Xishu ; Yang, Yunfeng ; Arkin, Adam P ; Firestone, Mary K ; Zhou, Jizhong

Nature communications, 2020-09, Vol.11 (1), p.4717-12, Article 4717 [Periódico revisado por pares]

England: Nature Publishing Group

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10
Synthesis of phylogeny and taxonomy into a comprehensive tree of life
Synthesis of phylogeny and taxonomy into a comprehensive tree of life
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Synthesis of phylogeny and taxonomy into a comprehensive tree of life

Hinchliff, Cody E. ; Smith, Stephen A. ; Allman, James F. ; Burleigh, J. Gordon ; Chaudhary, Ruchi ; Coghill, Lyndon M. ; Crandall, Keith A. ; Deng, Jiabin ; Drew, Bryan T. ; Gazis, Romina ; Gude, Karl ; Hibbett, David S. ; Katz, Laura A. ; Laughinghouse, H. Dail ; McTavish, Emily Jane ; Midford, Peter E. ; Owen, Christopher L. ; Ree, Richard H. ; Rees, Jonathan A. ; Soltis, Douglas E. ; Williams, Tiffani ; Cranston, Karen A.

Proceedings of the National Academy of Sciences - PNAS, 2015-10, Vol.112 (41), p.12764-12769 [Periódico revisado por pares]

United States: National Academy of Sciences

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