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The genomic signature of dog domestication reveals adaptation to a starch-rich diet
The genomic signature of dog domestication reveals adaptation to a starch-rich diet
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The genomic signature of dog domestication reveals adaptation to a starch-rich diet

Axelsson, Erik ; Ratnakumar, Abhirami ; Arendt, Maja-Louise ; Maqbool, Khurram ; Webster, Matthew T ; Perloski, Michele ; Liberg, Olof ; Arnemo, Jon M ; Hedhammar, Ake ; Lindblad-Toh, Kerstin

Nature (London), 2013-03, Vol.495 (7441), p.360-364 [Periódico revisado por pares]

England: Nature Publishing Group

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2
Identification of genomic regions associated with phenotypic variation between dog breeds using selection mapping
Identification of genomic regions associated with phenotypic variation between dog breeds using selection mapping
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Identification of genomic regions associated with phenotypic variation between dog breeds using selection mapping

Vaysse, Amaury ; Ratnakumar, Abhirami ; Derrien, Thomas ; Axelsson, Erik ; Rosengren Pielberg, Gerli ; Sigurdsson, Snaevar ; Fall, Tove ; Seppälä, Eija H ; Hansen, Mark S T ; Lawley, Cindy T ; Karlsson, Elinor K ; Bannasch, Danika ; Vilà, Carles ; Lohi, Hannes ; Galibert, Francis ; Fredholm, Merete ; Häggström, Jens ; Hedhammar, Ake ; André, Catherine ; Lindblad-Toh, Kerstin ; Hitte, Christophe ; Webster, Matthew T Akey, Joshua M.

PLoS genetics, 2011-10, Vol.7 (10), p.e1002316-e1002316 [Periódico revisado por pares]

United States: Public Library of Science

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3
Protein-Protein interactions uncover candidate ‘core genes’ within omnigenic disease networks
Protein-Protein interactions uncover candidate ‘core genes’ within omnigenic disease networks
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Protein-Protein interactions uncover candidate ‘core genes’ within omnigenic disease networks

Ratnakumar, Abhirami ; Weinhold, Nils ; Mar, Jessica C ; Riaz, Nadeem ; Barsh, Gregory S ; Liu, Xuanyao Liu, Xuanyao

PLoS genetics, 2020-07, Vol.16 (7), p.e1008903 [Periódico revisado por pares]

San Francisco: Public Library of Science

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4
Detecting positive selection within genomes: the problem of biased gene conversion
Detecting positive selection within genomes: the problem of biased gene conversion
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Detecting positive selection within genomes: the problem of biased gene conversion

Ratnakumar, Abhirami ; Mousset, Sylvain ; Glémin, Sylvain ; Berglund, Jonas ; Galtier, Nicolas ; Duret, Laurent ; Webster, Matthew T.

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2010-08, Vol.365 (1552), p.2571-2580 [Periódico revisado por pares]

England: The Royal Society

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5
Using paired-end sequences to optimise parameters for alignment of sequence reads against related genomes
Using paired-end sequences to optimise parameters for alignment of sequence reads against related genomes
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Using paired-end sequences to optimise parameters for alignment of sequence reads against related genomes

Ratnakumar, Abhirami ; McWilliam, Sean ; Barris, Wesley ; Dalrymple, Brian P

BMC genomics, 2010-08, Vol.11 (1), p.458-458, Article 458 [Periódico revisado por pares]

England: BioMed Central Ltd

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6
Quality control of the sheep bacterial artificial chromosome library, CHORI-243
Quality control of the sheep bacterial artificial chromosome library, CHORI-243
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Quality control of the sheep bacterial artificial chromosome library, CHORI-243

Ratnakumar, Abhirami ; Kirkness, Ewen F ; Dalrymple, Brian P

BMC research notes, 2010-12, Vol.3 (1), p.334-334, Article 334 [Periódico revisado por pares]

England: BioMed Central Ltd

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7
Death of PRDM9 coincides with stabilization of the recombination landscape in the dog genome
Death of PRDM9 coincides with stabilization of the recombination landscape in the dog genome
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Death of PRDM9 coincides with stabilization of the recombination landscape in the dog genome

Axelsson, Erik ; Webster, Matthew T ; Ratnakumar, Abhirami ; Ponting, Chris P ; Lindblad-Toh, Kerstin

Genome research, 2012-01, Vol.22 (1), p.51-63 [Periódico revisado por pares]

United States: Cold Spring Harbor Laboratory Press

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8
Precision Radiotherapy: Reduction in Radiation for Oropharyngeal Cancer in the 30 ROC Trial
Precision Radiotherapy: Reduction in Radiation for Oropharyngeal Cancer in the 30 ROC Trial
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Precision Radiotherapy: Reduction in Radiation for Oropharyngeal Cancer in the 30 ROC Trial

Riaz, Nadeem ; Sherman, Eric ; Pei, Xin ; Schöder, Heiko ; Grkovski, Milan ; Paudyal, Ramesh ; Katabi, Nora ; Selenica, Pier ; Yamaguchi, Takafumi N ; Ma, Daniel ; Lee, Simon K ; Shah, Rachna ; Kumar, Rahul ; Kuo, Fengshen ; Ratnakumar, Abhirami ; Aleynick, Nathan ; Brown, David ; Zhang, Zhigang ; Hatzoglou, Vaios ; Liu, Lydia Y ; Salcedo, Adriana ; Tsai, Chiaojung J ; McBride, Sean ; Morris, Luc G T ; Boyle, Jay ; Singh, Bhuvanesh ; Higginson, Daniel S ; Damerla, Rama R ; Paula, Arnaud da Cruz ; Price, Katharine ; Moore, Eric J ; Garcia, Joaquin J ; Foote, Robert ; Ho, Alan ; Wong, Richard J ; Chan, Timothy A ; Powell, Simon N ; Boutros, Paul C ; Humm, John L ; Shukla-Dave, Amita ; Pfister, David ; Reis-Filho, Jorge S ; Lee, Nancy

JNCI : Journal of the National Cancer Institute, 2021-06, Vol.113 (6), p.742-751 [Periódico revisado por pares]

United States: Oxford University Press

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9
A multiway analysis for identifying high integrity bovine BACs
A multiway analysis for identifying high integrity bovine BACs
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A multiway analysis for identifying high integrity bovine BACs

Ratnakumar, Abhirami ; Barris, Wesley ; McWilliam, Sean ; Brauning, Rudiger ; McEwan, John C ; Snelling, Warren M ; Dalrymple, Brian P

BMC genomics, 2009-01, Vol.10 (1), p.46-46, Article 46 [Periódico revisado por pares]

England: BioMed Central Ltd

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10
Estrogen activates Alzheimer's disease genes
Estrogen activates Alzheimer's disease genes
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Estrogen activates Alzheimer's disease genes

Ratnakumar, Abhirami ; Zimmerman, Samuel E. ; Jordan, Bryen A. ; Mar, Jessica C.

Alzheimer's & dementia : translational research & clinical interventions, 2019, Vol.5 (1), p.906-917 [Periódico revisado por pares]

United States: Elsevier Inc

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