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MG-RAST version 4—lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis
MG-RAST version 4—lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis
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MG-RAST version 4—lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis

Meyer, Folker ; Bagchi, Saurabh ; Chaterji, Somali ; Gerlach, Wolfgang ; Grama, Ananth ; Harrison, Travis ; Paczian, Tobias ; Trimble, William L ; Wilke, Andreas

Briefings in bioinformatics, 2019-07, Vol.20 (4), p.1151-1159 [Periódico revisado por pares]

England: Oxford University Press

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2
The RAST Server: rapid annotations using subsystems technology
The RAST Server: rapid annotations using subsystems technology
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The RAST Server: rapid annotations using subsystems technology

Aziz, Ramy K ; Bartels, Daniela ; Best, Aaron A ; DeJongh, Matthew ; Disz, Terrence ; Edwards, Robert A ; Formsma, Kevin ; Gerdes, Svetlana ; Glass, Elizabeth M ; Kubal, Michael ; Meyer, Folker ; Olsen, Gary J ; Olson, Robert ; Osterman, Andrei L ; Overbeek, Ross A ; McNeil, Leslie K ; Paarmann, Daniel ; Paczian, Tobias ; Parrello, Bruce ; Pusch, Gordon D ; Reich, Claudia ; Stevens, Rick ; Vassieva, Olga ; Vonstein, Veronika ; Wilke, Andreas ; Zagnitko, Olga

BMC Genomics, 2008-02, Vol.9 (1), p.75-75, Article 75 [Periódico revisado por pares]

England: BioMed Central Ltd

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3
The MG-RAST API explorer: an on-ramp for RESTful query composition
The MG-RAST API explorer: an on-ramp for RESTful query composition
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The MG-RAST API explorer: an on-ramp for RESTful query composition

Paczian, Tobias ; Trimble, William L ; Gerlach, Wolfgang ; Harrison, Travis ; Wilke, Andreas ; Meyer, Folker

BMC bioinformatics, 2019-11, Vol.20 (1), p.561-561, Article 561 [Periódico revisado por pares]

England: BioMed Central Ltd

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4
A RESTful API for accessing microbial community data for MG-RAST
A RESTful API for accessing microbial community data for MG-RAST
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A RESTful API for accessing microbial community data for MG-RAST

Wilke, Andreas ; Bischof, Jared ; Harrison, Travis ; Brettin, Tom ; D'Souza, Mark ; Gerlach, Wolfgang ; Matthews, Hunter ; Paczian, Tobias ; Wilkening, Jared ; Glass, Elizabeth M ; Desai, Narayan ; Meyer, Folker Gardner, Paul P.

PLoS computational biology, 2015-01, Vol.11 (1), p.e1004008-e1004008 [Periódico revisado por pares]

United States: Public Library of Science

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5
A Metagenomics Portal for a Democratized Sequencing World
A Metagenomics Portal for a Democratized Sequencing World
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A Metagenomics Portal for a Democratized Sequencing World

Wilke, Andreas ; Glass, Elizabeth M. ; Bartels, Daniela ; Bischof, Jared ; Braithwaite, Daniel ; D’Souza, Mark ; Gerlach, Wolfgang ; Harrison, Travis ; Keegan, Kevin ; Matthews, Hunter ; Kottmann, Renzo ; Paczian, Tobias ; Tang, Wei ; Trimble, William L. ; Yilmaz, Pelin ; Wilkening, Jared ; Desai, Narayan ; Meyer, Folker

Methods in Enzymology, 2013, Vol.531, p.487-523 [Periódico revisado por pares]

United States: Elsevier Science & Technology

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6
The MG-RAST metagenomics database and portal in 2015
The MG-RAST metagenomics database and portal in 2015
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The MG-RAST metagenomics database and portal in 2015

Wilke, Andreas ; Bischof, Jared ; Gerlach, Wolfgang ; Glass, Elizabeth ; Harrison, Travis ; Keegan, Kevin P ; Paczian, Tobias ; Trimble, William L ; Bagchi, Saurabh ; Grama, Ananth ; Chaterji, Somali ; Meyer, Folker

Nucleic acids research, 2016-01, Vol.44 (D1), p.D590-D594 [Periódico revisado por pares]

England: Oxford University Press

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7
The complete genome sequence for putative H2- and S-oxidizer Candidatus Sulfuricurvum sp., assembled de novo from an aquifer-derived metagenome
The complete genome sequence for putative H2- and S-oxidizer Candidatus Sulfuricurvum sp., assembled de novo from an aquifer-derived metagenome
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The complete genome sequence for putative H2- and S-oxidizer Candidatus Sulfuricurvum sp., assembled de novo from an aquifer-derived metagenome

Handley, Kim M. ; Bartels, Daniela ; O'Loughlin, Edward J. ; Williams, Kenneth H. ; Trimble, William L. ; Skinner, Kelly ; Gilbert, Jack A. ; Desai, Narayan ; Glass, Elizabeth M. ; Paczian, Tobias ; Wilke, Andreas ; Antonopoulos, Dionysios ; Kemner, Kenneth M. ; Meyer, Folker

Environmental microbiology, 2014-11, Vol.16 (11), p.3443-3462 [Periódico revisado por pares]

England: Blackwell Publishing Ltd

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8
The MG-RAST Metagenomics Database and Portal in 2015
The MG-RAST Metagenomics Database and Portal in 2015
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The MG-RAST Metagenomics Database and Portal in 2015

Wilke, Andreas ; Bischof, Jared ; Gerlach, Wolfgang ; Glass, Elizabeth ; Harrison, Travis ; Keegan, Kevin ; Paczian, Tobias ; Trimble, William L. ; Bagchi, Saurabh ; Grama, Ananth ; Chaterji, Somali ; Meyer, Folker

Nucleic acids research, 2015-12, Vol.44 (D1) [Periódico revisado por pares]

United States: Oxford University Press

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9
A RESTful API for Accessing Microbial Community Data for MG-RAST: e1004008
A RESTful API for Accessing Microbial Community Data for MG-RAST: e1004008
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A RESTful API for Accessing Microbial Community Data for MG-RAST: e1004008

Wilke, Andreas ; Bischof, Jared ; Harrison, Travis ; Brettin, Tom ; Gerlach, Wolfgang ; Matthews, Hunter ; Paczian, Tobias ; Wilkening, Jared ; Glass, Elizabeth M ; Desai, Narayan ; Meyer, Folker

PLoS computational biology, 2015-01, Vol.11 (1) [Periódico revisado por pares]

San Francisco: Public Library of Science

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10
National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation
National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation
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National Microbial Pathogen Database Resource (NMPDR): a genomics platform based on subsystem annotation

McNeil, Leslie Klis ; Reich, Claudia ; Aziz, Ramy K ; Bartels, Daniela ; Cohoon, Matthew ; Disz, Terry ; Edwards, Robert A ; Gerdes, Svetlana ; Hwang, Kaitlyn ; Kubal, Michael ; Margaryan, Gohar Rem ; Meyer, Folker ; Mihalo, William ; Olsen, Gary J ; Olson, Robert ; Osterman, Andrei ; Paarmann, Daniel ; Paczian, Tobias ; Parrello, Bruce ; Pusch, Gordon D ; Rodionov, Dmitry A ; Shi, Xinghua ; Vassieva, Olga ; Vonstein, Veronika ; Zagnitko, Olga ; Xia, Fangfang ; Zinner, Jenifer ; Overbeek, Ross ; Stevens, Rick

Nucleic acids research, 2007-01, Vol.35 (suppl-1), p.D347-D353 [Periódico revisado por pares]

England: Oxford University Press

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