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1
The genome portal of the Department of Energy Joint Genome Institute: 2014 updates
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The genome portal of the Department of Energy Joint Genome Institute: 2014 updates

Nordberg, Henrik ; Cantor, Michael ; Dusheyko, Serge ; Hua, Susan ; Poliakov, Alexander ; Shabalov, Igor ; Smirnova, Tatyana ; Grigoriev, Igor V ; Dubchak, Inna

Nucleic acids research, 2014-01, Vol.42 (Database issue), p.D26-D31 [Periódico revisado por pares]

England: Oxford University Press

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Genetic determinants of endophytism in the Arabidopsis root mycobiome
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Genetic determinants of endophytism in the Arabidopsis root mycobiome

Mesny, Fantin ; Miyauchi, Shingo ; Thiergart, Thorsten ; Pickel, Brigitte ; Atanasova, Lea ; Karlsson, Magnus ; Hüttel, Bruno ; Barry, Kerrie W ; Haridas, Sajeet ; Chen, Cindy ; Bauer, Diane ; Andreopoulos, William ; Pangilinan, Jasmyn ; LaButti, Kurt ; Riley, Robert ; Lipzen, Anna ; Clum, Alicia ; Drula, Elodie ; Henrissat, Bernard ; Kohler, Annegret ; Grigoriev, Igor V ; Martin, Francis M ; Hacquard, Stéphane

Nature communications, 2021-12, Vol.12 (1), p.7227-15, Article 7227 [Periódico revisado por pares]

England: Nature Publishing Group

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3
ContScout: sensitive detection and removal of contamination from annotated genomes
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ContScout: sensitive detection and removal of contamination from annotated genomes

Bálint, Balázs ; Merényi, Zsolt ; Hegedüs, Botond ; Grigoriev, Igor V ; Hou, Zhihao ; Földi, Csenge ; Nagy, László G

Nature communications, 2024-01, Vol.15 (1), p.936-936, Article 936 [Periódico revisado por pares]

England: Nature Publishing Group

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4
Sea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization
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Sea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization

Putnam, Nicholas H ; Srivastava, Mansi ; Hellsten, Uffe ; Dirks, Bill ; Chapman, Jarrod ; Salamov, Asaf ; Terry, Astrid ; Shapiro, Harris ; Lindquist, Erika ; Kapitonov, Vladimir V ; Jurka, Jerzy ; Genikhovich, Grigory ; Grigoriev, Igor V ; Lucas, Susan M ; Steele, Robert E ; Finnerty, John R ; Technau, Ulrich ; Martindale, Mark Q ; Rokhsar, Daniel S

Science (American Association for the Advancement of Science), 2007-07, Vol.317 (5834), p.86-94 [Periódico revisado por pares]

Washington, DC: American Association for the Advancement of Science

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5
A scaffolded and annotated reference genome of giant kelp (Macrocystis pyrifera)
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A scaffolded and annotated reference genome of giant kelp (Macrocystis pyrifera)

Diesel, Jose ; Molano, Gary ; Montecinos, Gabriel J ; DeWeese, Kelly ; Calhoun, Sara ; Kuo, Alan ; Lipzen, Anna ; Salamov, Asaf ; Grigoriev, Igor V ; Reed, Daniel C ; Miller, Robert J ; Nuzhdin, Sergey V ; Alberto, Filipe

BMC genomics, 2023-09, Vol.24 (1), p.543-543, Article 543 [Periódico revisado por pares]

England: BioMed Central Ltd

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6
Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis
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Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis

Jeffries, T.W ; Grigoriev, I.V ; Grimwood, J ; Laplaza, J.M ; Aerts, A ; Salamov, A ; Schmutz, J ; Lindquist, E ; Dehal, P ; Shapiro, H

Nature biotechnology, 2007-03, Vol.25 (3), p.319-326 [Periódico revisado por pares]

New York, NY: Nature Publishing Group

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7
Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii
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Evolution of novel wood decay mechanisms in Agaricales revealed by the genome sequences of Fistulina hepatica and Cylindrobasidium torrendii

Floudas, Dimitrios ; Held, Benjamin W. ; Riley, Robert ; Nagy, Laszlo G. ; Koehler, Gage ; Ransdell, Anthony S. ; Younus, Hina ; Chow, Julianna ; Chiniquy, Jennifer ; Lipzen, Anna ; Tritt, Andrew ; Sun, Hui ; Haridas, Sajeet ; LaButti, Kurt ; Ohm, Robin A. ; Kües, Ursula ; Blanchette, Robert A. ; Grigoriev, Igor V. ; Minto, Robert E. ; Hibbett, David S.

Fungal genetics and biology, 2015-03, Vol.76, p.78-92 [Periódico revisado por pares]

United States: Elsevier Inc

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8
genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation
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genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation

Blanc, Guillaume ; Agarkova, Irina ; Grimwood, Jane ; Kuo, Alan ; Brueggeman, Andrew ; Dunigan, David D ; Gurnon, James ; Ladunga, Istvan ; Lindquist, Erika ; Lucas, Susan ; Pangilinan, Jasmyn ; Pröschold, Thomas ; Salamov, Asaf ; Schmutz, Jeremy ; Weeks, Donald ; Yamada, Takashi ; Lomsadze, Alexandre ; Borodovsky, Mark ; Claverie, Jean-Michel ; Grigoriev, Igor V ; Van Etten, James L

Genome Biology (Online Edition), 2012-05, Vol.13 (5), p.R39-R39 [Periódico revisado por pares]

England: Springer-Verlag

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9
The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties
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The genome of wine yeast Dekkera bruxellensis provides a tool to explore its food-related properties

Piškur, Jure ; Ling, Zhihao ; Marcet-Houben, Marina ; Ishchuk, Olena P. ; Aerts, Andrea ; LaButti, Kurt ; Copeland, Alex ; Lindquist, Erika ; Barry, Kerrie ; Compagno, Concetta ; Bisson, Linda ; Grigoriev, Igor V. ; Gabaldón, Toni ; Phister, Trevor

International journal of food microbiology, 2012-07, Vol.157 (2), p.202-209 [Periódico revisado por pares]

Netherlands: Elsevier B.V

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10
Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales
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Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales

Castanera, Raúl ; Pérez, Gúmer ; López-Varas, Leticia ; Amselem, Joëlle ; LaButti, Kurt ; Singan, Vasanth ; Lipzen, Anna ; Haridas, Sajeet ; Barry, Kerrie ; Grigoriev, Igor V ; Pisabarro, Antonio G ; Ramírez, Lucía

BMC genomics, 2017-11, Vol.18 (1), p.883-883, Article 883 [Periódico revisado por pares]

England: BioMed Central Ltd

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