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Predicting the molecular complexity of sequencing libraries
Predicting the molecular complexity of sequencing libraries
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Predicting the molecular complexity of sequencing libraries

Daley, Timothy ; Smith, Andrew D

Nature methods, 2013-04, Vol.10 (4), p.325-327 [Periódico revisado por pares]

United States: Nature Publishing Group

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2
CRISPR-mediated live imaging of genome editing and transcription
CRISPR-mediated live imaging of genome editing and transcription
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CRISPR-mediated live imaging of genome editing and transcription

Wang, Haifeng ; Nakamura, Muneaki ; Abbott, Timothy R ; Zhao, Dehua ; Luo, Kaiwen ; Yu, Cordelia ; Nguyen, Cindy M ; Lo, Albert ; Daley, Timothy P ; La Russa, Marie ; Liu, Yanxia ; Qi, Lei S

Science (American Association for the Advancement of Science), 2019-09, Vol.365 (6459), p.1301-1305 [Periódico revisado por pares]

United States: The American Association for the Advancement of Science

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3
A benchmark of algorithms for the analysis of pooled CRISPR screens
A benchmark of algorithms for the analysis of pooled CRISPR screens
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A benchmark of algorithms for the analysis of pooled CRISPR screens

Bodapati, Sunil ; Daley, Timothy P ; Lin, Xueqiu ; Zou, James ; Qi, Lei S

Genome Biology, 2020-03, Vol.21 (1), p.62-62, Article 62 [Periódico revisado por pares]

England: BioMed Central

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4
Unsupervised clustering and epigenetic classification of single cells
Unsupervised clustering and epigenetic classification of single cells
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Unsupervised clustering and epigenetic classification of single cells

Zamanighomi, Mahdi ; Lin, Zhixiang ; Daley, Timothy ; Chen, Xi ; Duren, Zhana ; Schep, Alicia ; Greenleaf, William J ; Wong, Wing Hung

Nature communications, 2018-06, Vol.9 (1), p.2410-8, Article 2410 [Periódico revisado por pares]

England: Nature Publishing Group

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5
CRISPhieRmix: a hierarchical mixture model for CRISPR pooled screens
CRISPhieRmix: a hierarchical mixture model for CRISPR pooled screens
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CRISPhieRmix: a hierarchical mixture model for CRISPR pooled screens

Daley, Timothy P ; Lin, Zhixiang ; Lin, Xueqiu ; Liu, Yanxia ; Wong, Wing Hung ; Qi, Lei S

Genome Biology, 2018-10, Vol.19 (1), p.159-13, Article 159 [Periódico revisado por pares]

England: BioMed Central Ltd

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6
GEMINI: a variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens
GEMINI: a variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens
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GEMINI: a variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens

Zamanighomi, Mahdi ; Jain, Sidharth S ; Ito, Takahiro ; Pal, Debjani ; Daley, Timothy P ; Sellers, William R

Genome Biology, 2019-07, Vol.20 (1), p.137-137, Article 137 [Periódico revisado por pares]

England: BioMed Central Ltd

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7
2-Deoxy-D-glucose reduces epilepsy progression by NRSF-CtBP-dependent metabolic regulation of chromatin structure
2-Deoxy-D-glucose reduces epilepsy progression by NRSF-CtBP-dependent metabolic regulation of chromatin structure
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2-Deoxy-D-glucose reduces epilepsy progression by NRSF-CtBP-dependent metabolic regulation of chromatin structure

Roopra, Avtar ; Garriga-Canut, Mireia ; Schoenike, Barry ; Qazi, Romena ; Bergendahl, Karen ; Daley, Timothy J ; Pfender, Rebecca M ; Morrison, John F ; Ockuly, Jeffrey ; Stafstrom, Carl ; Sutula, Thomas

Nature neuroscience, 2006-11, Vol.9 (11), p.1382-1387 [Periódico revisado por pares]

United States: Nature Publishing Group

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8
Localized Domains of G9a-Mediated Histone Methylation Are Required for Silencing of Neuronal Genes
Localized Domains of G9a-Mediated Histone Methylation Are Required for Silencing of Neuronal Genes
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Localized Domains of G9a-Mediated Histone Methylation Are Required for Silencing of Neuronal Genes

Roopra, Avtar ; Qazi, Romena ; Schoenike, Barry ; Daley, Timothy J ; Morrison, John F

Molecular cell, 2004-06, Vol.14 (6), p.727-738 [Periódico revisado por pares]

United States: Elsevier Inc

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9
ROP: dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues
ROP: dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues
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ROP: dumpster diving in RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues

Mangul, Serghei ; Yang, Harry Taegyun ; Strauli, Nicolas ; Gruhl, Franziska ; Porath, Hagit T ; Hsieh, Kevin ; Chen, Linus ; Daley, Timothy ; Christenson, Stephanie ; Wesolowska-Andersen, Agata ; Spreafico, Roberto ; Rios, Cydney ; Eng, Celeste ; Smith, Andrew D ; Hernandez, Ryan D ; Ophoff, Roel A ; Santana, Jose Rodriguez ; Levanon, Erez Y ; Woodruff, Prescott G ; Burchard, Esteban ; Seibold, Max A ; Shifman, Sagiv ; Eskin, Eleazar ; Zaitlen, Noah

Genome Biology, 2018-02, Vol.19 (1), p.36-36, Article 36 [Periódico revisado por pares]

England: BioMed Central Ltd

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10
Centennial-scale climate change in Ireland during the Holocene
Centennial-scale climate change in Ireland during the Holocene
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Centennial-scale climate change in Ireland during the Holocene

Swindles, Graeme T. ; Lawson, Ian T. ; Matthews, Ian P. ; Blaauw, Maarten ; Daley, Timothy J. ; Charman, Dan J. ; Roland, Thomas P. ; Plunkett, Gill ; Schettler, Georg ; Gearey, Benjamin R. ; Turner, T. Edward ; Rea, Heidi A. ; Roe, Helen M. ; Amesbury, Matthew J. ; Chambers, Frank M. ; Holmes, Jonathan ; Mitchell, Fraser J.G. ; Blackford, Jeffrey ; Blundell, Antony ; Branch, Nicholas ; Holmes, Jane ; Langdon, Peter ; McCarroll, Julia ; McDermott, Frank ; Oksanen, Pirita O. ; Pritchard, Oliver ; Stastney, Phil ; Stefanini, Bettina ; Young, Dan ; Wheeler, Jane ; Becker, Katharina ; Armit, Ian

Earth-science reviews, 2013-11, Vol.126, p.300-320 [Periódico revisado por pares]

Amsterdam: Elsevier B.V

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