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Path2Models: large-scale generation of computational models from biochemical pathway maps
Path2Models: large-scale generation of computational models from biochemical pathway maps
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Path2Models: large-scale generation of computational models from biochemical pathway maps

Büchel, Finja ; Rodriguez, Nicolas ; Swainston, Neil ; Wrzodek, Clemens ; Czauderna, Tobias ; Keller, Roland ; Mittag, Florian ; Schubert, Michael ; Glont, Mihai ; Golebiewski, Martin ; van Iersel, Martijn ; Keating, Sarah ; Rall, Matthias ; Wybrow, Michael ; Hermjakob, Henning ; Hucka, Michael ; Kell, Douglas B ; Müller, Wolfgang ; Mendes, Pedro ; Zell, Andreas ; Chaouiya, Claudine ; Saez-Rodriguez, Julio ; Schreiber, Falk ; Laibe, Camille ; Dräger, Andreas ; Le Novère, Nicolas

BMC systems biology, 2013-11, Vol.7 (1), p.116-116, Article 116 [Periódico revisado por pares]

England: BioMed Central Ltd

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Linking the epigenome to the genome: correlation of different features to DNA methylation of CpG islands
Linking the epigenome to the genome: correlation of different features to DNA methylation of CpG islands
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Linking the epigenome to the genome: correlation of different features to DNA methylation of CpG islands

Wrzodek, Clemens ; Büchel, Finja ; Hinselmann, Georg ; Eichner, Johannes ; Mittag, Florian ; Zell, Andreas Christensen, Brock C.

PloS one, 2012-04, Vol.7 (4), p.e35327-e35327 [Periódico revisado por pares]

United States: Public Library of Science

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3
Integrative pathway-based approach for genome-wide association studies: identification of new pathways for rheumatoid arthritis and type 1 diabetes
Integrative pathway-based approach for genome-wide association studies: identification of new pathways for rheumatoid arthritis and type 1 diabetes
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Integrative pathway-based approach for genome-wide association studies: identification of new pathways for rheumatoid arthritis and type 1 diabetes

Büchel, Finja ; Mittag, Florian ; Wrzodek, Clemens ; Zell, Andreas ; Gasser, Thomas ; Sharma, Manu Chamaillard, Mathias

PloS one, 2013-10, Vol.8 (10), p.e78577-e78577 [Periódico revisado por pares]

United States: Public Library of Science

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4
Qualitative translation of relations from BioPAX to SBML qual
Qualitative translation of relations from BioPAX to SBML qual
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Qualitative translation of relations from BioPAX to SBML qual

BÜCHEL, Finja ; WRZODEK, Clemens ; MITTAG, Florian ; DRÄGER, Andreas ; EICHNER, Johannes ; RODRIGUEZ, Nicolas ; LE NOVERE, Nicolas ; ZELL, Andreas

Bioinformatics (Oxford, England), 2012-10, Vol.28 (20), p.2648-2653 [Periódico revisado por pares]

Oxford: Oxford University Press

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5
Use of support vector machines for disease risk prediction in genome-wide association studies: Concerns and opportunities
Use of support vector machines for disease risk prediction in genome-wide association studies: Concerns and opportunities
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Use of support vector machines for disease risk prediction in genome-wide association studies: Concerns and opportunities

Mittag, Florian ; Büchel, Finja ; Saad, Mohamad ; Jahn, Andreas ; Schulte, Claudia ; Bochdanovits, Zoltan ; Simón-Sánchez, Javier ; Nalls, Mike A. ; Keller, Margaux ; Hernandez, Dena G. ; Gibbs, J. Raphael ; Lesage, Suzanne ; Brice, Alexis ; Heutink, Peter ; Martinez, Maria ; Wood, Nicholas W ; Hardy, John ; Singleton, Andrew B. ; Zell, Andreas ; Gasser, Thomas ; Sharma, Manu

Human mutation, 2012-12, Vol.33 (12), p.1708-1718 [Periódico revisado por pares]

Hoboken: Wiley Subscription Services, Inc., A Wiley Company

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6
InCroMAP: integrated analysis of cross-platform microarray and pathway data
InCroMAP: integrated analysis of cross-platform microarray and pathway data
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InCroMAP: integrated analysis of cross-platform microarray and pathway data

Wrzodek, Clemens ; Eichner, Johannes ; Büchel, Finja ; Zell, Andreas

Bioinformatics, 2013-02, Vol.29 (4), p.506-508 [Periódico revisado por pares]

England: Oxford University Press

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7
Loss of mitochondrial peptidase Clpp leads to infertility, hearing loss plus growth retardation via accumulation of CLPX, mtDNA and inflammatory factors
Loss of mitochondrial peptidase Clpp leads to infertility, hearing loss plus growth retardation via accumulation of CLPX, mtDNA and inflammatory factors
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Loss of mitochondrial peptidase Clpp leads to infertility, hearing loss plus growth retardation via accumulation of CLPX, mtDNA and inflammatory factors

Gispert, Suzana ; Parganlija, Dajana ; Klinkenberg, Michael ; Dröse, Stefan ; Wittig, Ilka ; Mittelbronn, Michel ; Grzmil, Pawel ; Koob, Sebastian ; Hamann, Andrea ; Walter, Michael ; Büchel, Finja ; Adler, Thure ; Hrabé de Angelis, Martin ; Busch, Dirk H ; Zell, Andreas ; Reichert, Andreas S ; Brandt, Ulrich ; Osiewacz, Heinz D ; Jendrach, Marina ; Auburger, Georg

Human molecular genetics, 2013-12, Vol.22 (24), p.4871-4887 [Periódico revisado por pares]

England: Oxford University Press

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8
Precise generation of systems biology models from KEGG pathways
Precise generation of systems biology models from KEGG pathways
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Precise generation of systems biology models from KEGG pathways

Wrzodek, Clemens ; Büchel, Finja ; Ruff, Manuel ; Dräger, Andreas ; Zell, Andreas

BMC systems biology, 2013-02, Vol.7 (1), p.15-15 [Periódico revisado por pares]

England: BioMed Central Ltd

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9
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools
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SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools

Chaouiya, Claudine ; Bérenguier, Duncan ; Keating, Sarah M ; Naldi, Aurélien ; van Iersel, Martijn P ; Rodriguez, Nicolas ; Dräger, Andreas ; Büchel, Finja ; Cokelaer, Thomas ; Kowal, Bryan ; Wicks, Benjamin ; Gonçalves, Emanuel ; Dorier, Julien ; Page, Michel ; Monteiro, Pedro T ; von Kamp, Axel ; Xenarios, Ioannis ; de Jong, Hidde ; Hucka, Michael ; Klamt, Steffen ; Thieffry, Denis ; Le Novère, Nicolas ; Saez-Rodriguez, Julio ; Helikar, Tomáš

BMC systems biology, 2013-12, Vol.7 (1), p.135-135 [Periódico revisado por pares]

England: BioMed Central Ltd

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10
ProDGe: investigating protein-protein interactions at the domain level
ProDGe: investigating protein-protein interactions at the domain level
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ProDGe: investigating protein-protein interactions at the domain level

Büchel, Finja ; Wrzodek, Clemens ; Mittag, Florian ; Dräger, Andreas ; Schröder, Adrian ; Zell, Andreas

Nature precedings, 2011-08

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