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1
Resurgence of COVID-19 in Manaus, Brazil, despite high seroprevalence
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Artigo
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Resurgence of COVID-19 in Manaus, Brazil, despite high seroprevalence

Sabino, Ester C ; Buss, Lewis F ; Carvalho, Maria P S ; Prete, Carlos A ; Crispim, Myuki A E ; Fraiji, Nelson A ; Pereira, Rafael H M ; Parag, Kris V ; da Silva Peixoto, Pedro ; Kraemer, Moritz U G ; Oikawa, Marcio K ; Salomon, Tassila ; Cucunuba, Zulma M ; Castro, Márcia C ; de Souza Santos, Andreza Aruska ; Nascimento, Vítor H ; Pereira, Henrique S ; Ferguson, Neil M ; Pybus, Oliver G ; Kucharski, Adam ; Busch, Michael P ; Dye, Christopher ; Faria, Nuno R

The Lancet (British edition), 2021-02, Vol.397 (10273), p.452-455 [Periódico revisado por pares]

England: Elsevier Ltd

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2
Nephropathia Epidemica Caused by Puumala Virus in Bank Voles, Scania, Southern Sweden
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Artigo
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Nephropathia Epidemica Caused by Puumala Virus in Bank Voles, Scania, Southern Sweden

Ling, Jiaxin ; Lundeberg, Elin Economou ; Wasberg, Anishia ; Faria, Inês R ; Vucicevic, Sanja ; Settergren, Bo ; Lundkvist, Åke

Emerging infectious diseases, 2024-04, Vol.30 (4), p.732-737 [Periódico revisado por pares]

United States: U.S. National Center for Infectious Diseases

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3
SERAPHIM: studying environmental rasters and phylogenetically informed movements
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Artigo
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SERAPHIM: studying environmental rasters and phylogenetically informed movements

Dellicour, Simon ; Rose, Rebecca ; Faria, Nuno R ; Lemey, Philippe ; Pybus, Oliver G

Bioinformatics (Oxford, England), 2016-10, Vol.32 (20), p.3204-3206 [Periódico revisado por pares]

England

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4
An allele-selective inter-chromosomal protein bridge supports monogenic antigen expression in the African trypanosome
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Artigo
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An allele-selective inter-chromosomal protein bridge supports monogenic antigen expression in the African trypanosome

Faria, Joana R C ; Tinti, Michele ; Marques, Catarina A ; Zoltner, Martin ; Yoshikawa, Harunori ; Field, Mark C ; Horn, David

Nature communications, 2023-12, Vol.14 (1), p.8200-18, Article 8200 [Periódico revisado por pares]

England: Nature Publishing Group

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5
Using multiple sampling strategies to estimate SARS-CoV-2 epidemiological parameters from genomic sequencing data
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Artigo
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Using multiple sampling strategies to estimate SARS-CoV-2 epidemiological parameters from genomic sequencing data

Inward, Rhys P D ; Parag, Kris V ; Faria, Nuno R

Nature communications, 2022-09, Vol.13 (1), p.5587-5587, Article 5587 [Periódico revisado por pares]

England: Nature Publishing Group

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6
Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak
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Artigo
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Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak

Dellicour, Simon ; Baele, Guy ; Dudas, Gytis ; Faria, Nuno R ; Pybus, Oliver G ; Suchard, Marc A ; Rambaut, Andrew ; Lemey, Philippe

Nature communications, 2018-06, Vol.9 (1), p.2222-9, Article 2222 [Periódico revisado por pares]

England: Nature Publishing Group

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7
Detection of Chikungunya virus in bodily fluids: The INOVACHIK cohort study
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Detection of Chikungunya virus in bodily fluids: The INOVACHIK cohort study

Martins, Ezequias B ; Silva, Michele F B ; Tassinari, Wagner S ; de Bruycker-Nogueira, Fernanda ; Moraes, Isabella C V ; Rodrigues, Cintia D S ; Santos, Carolina C ; Sampaio, Simone A ; Pina-Costa, Anielle ; Fabri, Allison A ; Guerra-Campos, Vinícius ; Santos, Nayara A ; Faria, Nieli R C ; Filippis, Ana Maria B ; Brasil, Patrícia ; Calvet, Guilherme A Messer, William B.

PLoS neglected tropical diseases, 2022-03, Vol.16 (3), p.e0010242-e0010242 [Periódico revisado por pares]

United States: Public Library of Science

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8
Country-level pandemic risk and preparedness classification based on COVID-19 data: A machine learning approach
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Country-level pandemic risk and preparedness classification based on COVID-19 data: A machine learning approach

Bird, Jordan J ; Barnes, Chloe M ; Premebida, Cristiano ; Ekárt, Anikó ; Faria, Diego R Hatzikirou, Haralampos

PloS one, 2020-10, Vol.15 (10), p.e0241332-e0241332 [Periódico revisado por pares]

United States: Public Library of Science

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9
Single cell analysis of lymph node tissue from HIV-1 infected patients reveals that the majority of CD4+ T-cells contain one HIV-1 DNA molecule
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Single cell analysis of lymph node tissue from HIV-1 infected patients reveals that the majority of CD4+ T-cells contain one HIV-1 DNA molecule

Josefsson, Lina ; Palmer, Sarah ; Faria, Nuno R ; Lemey, Philippe ; Casazza, Joseph ; Ambrozak, David ; Kearney, Mary ; Shao, Wei ; Kottilil, Shyamasundaran ; Sneller, Michael ; Mellors, John ; Coffin, John M ; Maldarelli, Frank Luban, Jeremy

PLoS pathogens, 2013, Vol.9 (6), p.e1003432-e1003432 [Periódico revisado por pares]

United States: Public Library of Science

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10
Distinct rates and patterns of spread of the major HIV-1 subtypes in Central and East Africa
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Artigo
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Distinct rates and patterns of spread of the major HIV-1 subtypes in Central and East Africa

Faria, Nuno R ; Vidal, Nicole ; Lourenco, José ; Raghwani, Jayna ; Sigaloff, Kim C E ; Tatem, Andy J ; van de Vijver, David A M ; Pineda-Peña, Andrea-Clemencia ; Rose, Rebecca ; Wallis, Carole L ; Ahuka-Mundeke, Steve ; Muyembe-Tamfum, Jean-Jacques ; Muwonga, Jérémie ; Suchard, Marc A ; Rinke de Wit, Tobias F ; Hamers, Raph L ; Ndembi, Nicaise ; Baele, Guy ; Peeters, Martine ; Pybus, Oliver G ; Lemey, Philippe ; Dellicour, Simon Swanstrom, Ronald

PLoS pathogens, 2019-12, Vol.15 (12), p.e1007976-e1007976 [Periódico revisado por pares]

United States: Public Library of Science

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